G153275


Basic Information

Item Value
gene id G153275
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 49602123 ~ 49602332 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU175415
ctggtgacagtccttctcatgggaatagtaaagaagaactccctaagggaatactggagcacagatcctatgtttgcaacACCCTTCTCTTTTCCCAAGACCGCTTCCTAGTTCTGCTGTGATGCCTGCATTTCCTCAACAATGCTACAGCCAACCTGACACTTTGTACGTGGACAATTGGTACAGAAGTCTTCCAGCATCTGCTCTCCA

Function

NR:

description
PREDICTED: piggyBac transposable element-derived protein 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU175415 True 210 lncRNA 0.38 1 49602123 49602332

Neighbor

gene id symbol gene type direction distance location
cdkn1cb LOC106560698 coding upstream 863572 48736519 ~ 48738551 (+)
prr5l prr5l coding upstream 1100243 48481528 ~ 48501880 (+)
fcsk fuk coding upstream 1154336 48394983 ~ 48447787 (+)
LOC118940424 NA coding upstream 1185065 48412707 ~ 48417058 (+)
osbpl5 LOC106560704 coding upstream 1468149 48027409 ~ 48133974 (+)
LOC110490948 LOC106560694 coding downstream 146781 49749113 ~ 49767125 (+)
LOC110491010 LOC106560692 coding downstream 465877 50068209 ~ 50093310 (+)
LOC110491026 LOC106560691 coding downstream 496055 50098387 ~ 50100624 (+)
LOC110491039 LOC106560690 coding downstream 548129 50150461 ~ 50159171 (+)
LOC110491040 LOC106560688 coding downstream 578968 50181300 ~ 50198685 (+)
G153274 NA non-coding upstream 481 49601422 ~ 49601642 (+)
G153261 NA non-coding upstream 19884 49581922 ~ 49582239 (+)
G153260 NA non-coding upstream 20506 49581407 ~ 49581617 (+)
G153238 NA non-coding upstream 50281 49551509 ~ 49551842 (+)
G153137 hmg20a non-coding upstream 142508 49455107 ~ 49459615 (+)
G153373 NA non-coding downstream 139839 49742171 ~ 49768855 (+)
G153391 NA non-coding downstream 172964 49775296 ~ 49775541 (+)
G153393 NA non-coding downstream 175139 49777471 ~ 49777700 (+)
G153394 NA non-coding downstream 177059 49779391 ~ 49779599 (+)
G153403 NA non-coding downstream 192132 49794464 ~ 49794708 (+)
G152167 NA other upstream 1044437 48556782 ~ 48557686 (+)
G150997 NA other upstream 2054544 47497948 ~ 47547579 (+)
uevld uevld other upstream 2616897 46981686 ~ 47007672 (+)
G148191 NA other upstream 4109744 45472082 ~ 45492379 (+)
G147510 NA other upstream 4730623 44870800 ~ 44871500 (+)
G154859 NA other downstream 1563083 51165415 ~ 51167174 (+)
LOC110501653 LOC106560673 other downstream 1719464 51317121 ~ 51339537 (+)
rl28 rl28 other downstream 1809934 51412121 ~ 51417154 (+)
G155541 NA other downstream 1818515 51420847 ~ 51421122 (+)

Expression


Co-expression Network