Gene
RNA
| Item | Value |
|---|---|
| gene id | G153842 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 49759235 ~ 49768821 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| junctional adhesion molecule A-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU176020 | True | 483 | lncRNA | 0.43 | 2 | 49759235 | 49768821 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118936760 | NA | coding | downstream | 19989 | 49738842 ~ 49739246 (-) |
| hmg20a | hmg20a | coding | downstream | 283864 | 49451688 ~ 49475371 (-) |
| peak1 | peak1 | coding | downstream | 331952 | 49166669 ~ 49427283 (-) |
| syt12 | syt12 | coding | downstream | 603974 | 49114742 ~ 49155261 (-) |
| cat | cata | coding | downstream | 644706 | 49102986 ~ 49114529 (-) |
| LOC110490968 | LOC105006464 | coding | upstream | 33208 | 49801952 ~ 49837047 (-) |
| LOC110490984 | LOC106560693 | coding | upstream | 194075 | 49962896 ~ 50037892 (-) |
| plscr3a | LOC106560726 | coding | upstream | 355740 | 50124561 ~ 50127403 (-) |
| LOC118937274 | NA | coding | upstream | 360694 | 50129515 ~ 50131269 (-) |
| LOC110491057 | LOC100136935 | coding | upstream | 503397 | 50272218 ~ 50287727 (-) |
| G153822 | NA | non-coding | downstream | 15239 | 49736112 ~ 49743996 (-) |
| G153821 | NA | non-coding | downstream | 23402 | 49735599 ~ 49735833 (-) |
| G153652 | NA | non-coding | downstream | 32844 | 49602409 ~ 49726391 (-) |
| G153755 | NA | non-coding | downstream | 162086 | 49596827 ~ 49597149 (-) |
| G153746 | NA | non-coding | downstream | 177405 | 49581621 ~ 49581830 (-) |
| G153848 | NA | non-coding | upstream | 2721 | 49771542 ~ 49771782 (-) |
| G153861 | NA | non-coding | upstream | 16107 | 49784928 ~ 49785294 (-) |
| G153863 | NA | non-coding | upstream | 18830 | 49787651 ~ 49787919 (-) |
| G153864 | NA | non-coding | upstream | 20574 | 49789395 ~ 49789617 (-) |
| G152024 | NA | other | downstream | 1455572 | 48303311 ~ 48303663 (-) |
| G151920 | NA | other | downstream | 1532291 | 48226299 ~ 48226944 (-) |
| G151875 | NA | other | downstream | 1570957 | 48187958 ~ 48188278 (-) |
| G151474 | NA | other | downstream | 1907887 | 47850785 ~ 47851348 (-) |
| G150675 | LOC100653436 | other | downstream | 2553802 | 47194893 ~ 47205433 (-) |
| G154300 | NA | other | upstream | 332609 | 50101430 ~ 50107447 (-) |
| G154338 | NA | other | upstream | 387865 | 50156686 ~ 50157825 (-) |
| G155003 | NA | other | upstream | 646922 | 50415743 ~ 50452147 (-) |
| G155072 | NA | other | upstream | 810977 | 50579798 ~ 50581349 (-) |
| G155281 | LOC106560681 | other | upstream | 1202255 | 50971076 ~ 50971935 (-) |
