G153393


Basic Information

Item Value
gene id G153393
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 49777471 ~ 49777700 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU175538
CCATGTAAATAATATAAATTACCCTCTCTGCCTCAGTGAAaggaataagtatatttcataaGTCTAGAAATCAGAACCCAACAATACTATGCAATTAGAAAGGTTCAAAATTAATGTAAGACATCACTGGACAGttaaaatatatggcacatggaaatcaAAAGAGCGTGGTCTATGGAGATGGGTGTGATGTGCTAAGAGTAGCAAAAAACTGAGGATCAGTACTACTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU175538 True 230 lncRNA 0.35 1 49777471 49777700

Neighbor

gene id symbol gene type direction distance location
LOC110490948 LOC106560694 coding upstream 10346 49749113 ~ 49767125 (+)
cdkn1cb LOC106560698 coding upstream 1038920 48736519 ~ 48738551 (+)
prr5l prr5l coding upstream 1275591 48481528 ~ 48501880 (+)
fcsk fuk coding upstream 1329684 48394983 ~ 48447787 (+)
LOC110491010 LOC106560692 coding downstream 290509 50068209 ~ 50093310 (+)
LOC110491026 LOC106560691 coding downstream 320687 50098387 ~ 50100624 (+)
LOC110491039 LOC106560690 coding downstream 372761 50150461 ~ 50159171 (+)
LOC110491040 LOC106560688 coding downstream 403600 50181300 ~ 50198685 (+)
LOC110491046 LOC106560687 coding downstream 446038 50223738 ~ 50236226 (+)
G153391 NA non-coding upstream 1930 49775296 ~ 49775541 (+)
G153373 NA non-coding upstream 8616 49742171 ~ 49768855 (+)
G153275 NA non-coding upstream 175139 49602123 ~ 49602332 (+)
G153274 NA non-coding upstream 175829 49601422 ~ 49601642 (+)
G153261 NA non-coding upstream 195232 49581922 ~ 49582239 (+)
G153394 NA non-coding downstream 1691 49779391 ~ 49779599 (+)
G153403 NA non-coding downstream 16764 49794464 ~ 49794708 (+)
G153406 NA non-coding downstream 21302 49799002 ~ 49819182 (+)
G153425 NA non-coding downstream 68518 49846218 ~ 49846496 (+)
G153431 NA non-coding downstream 79267 49856967 ~ 49857178 (+)
G152167 NA other upstream 1219785 48556782 ~ 48557686 (+)
G150997 NA other upstream 2229892 47497948 ~ 47547579 (+)
uevld uevld other upstream 2792245 46981686 ~ 47007672 (+)
G148191 NA other upstream 4285092 45472082 ~ 45492379 (+)
G147510 NA other upstream 4905971 44870800 ~ 44871500 (+)
G154859 NA other downstream 1387715 51165415 ~ 51167174 (+)
LOC110501653 LOC106560673 other downstream 1544096 51317121 ~ 51339537 (+)
rl28 rl28 other downstream 1634566 51412121 ~ 51417154 (+)
G155541 NA other downstream 1643147 51420847 ~ 51421122 (+)

Expression


Co-expression Network