Gene
RNA
| Item | Value |
|---|---|
| gene id | G153394 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 49779391 ~ 49779599 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| transposase, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU175539 | True | 209 | lncRNA | 0.52 | 1 | 49779391 | 49779599 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490948 | LOC106560694 | coding | upstream | 12266 | 49749113 ~ 49767125 (+) |
| cdkn1cb | LOC106560698 | coding | upstream | 1040840 | 48736519 ~ 48738551 (+) |
| prr5l | prr5l | coding | upstream | 1277511 | 48481528 ~ 48501880 (+) |
| fcsk | fuk | coding | upstream | 1331604 | 48394983 ~ 48447787 (+) |
| LOC110491010 | LOC106560692 | coding | downstream | 288610 | 50068209 ~ 50093310 (+) |
| LOC110491026 | LOC106560691 | coding | downstream | 318788 | 50098387 ~ 50100624 (+) |
| LOC110491039 | LOC106560690 | coding | downstream | 370862 | 50150461 ~ 50159171 (+) |
| LOC110491040 | LOC106560688 | coding | downstream | 401701 | 50181300 ~ 50198685 (+) |
| LOC110491046 | LOC106560687 | coding | downstream | 444139 | 50223738 ~ 50236226 (+) |
| G153393 | NA | non-coding | upstream | 1691 | 49777471 ~ 49777700 (+) |
| G153391 | NA | non-coding | upstream | 3850 | 49775296 ~ 49775541 (+) |
| G153373 | NA | non-coding | upstream | 10536 | 49742171 ~ 49768855 (+) |
| G153275 | NA | non-coding | upstream | 177059 | 49602123 ~ 49602332 (+) |
| G153274 | NA | non-coding | upstream | 177749 | 49601422 ~ 49601642 (+) |
| G153403 | NA | non-coding | downstream | 14865 | 49794464 ~ 49794708 (+) |
| G153406 | NA | non-coding | downstream | 19403 | 49799002 ~ 49819182 (+) |
| G153425 | NA | non-coding | downstream | 66619 | 49846218 ~ 49846496 (+) |
| G153431 | NA | non-coding | downstream | 77368 | 49856967 ~ 49857178 (+) |
| G153433 | NA | non-coding | downstream | 79980 | 49859579 ~ 49859799 (+) |
| G152167 | NA | other | upstream | 1221705 | 48556782 ~ 48557686 (+) |
| G150997 | NA | other | upstream | 2231812 | 47497948 ~ 47547579 (+) |
| uevld | uevld | other | upstream | 2794165 | 46981686 ~ 47007672 (+) |
| G148191 | NA | other | upstream | 4287012 | 45472082 ~ 45492379 (+) |
| G147510 | NA | other | upstream | 4907891 | 44870800 ~ 44871500 (+) |
| G154859 | NA | other | downstream | 1385816 | 51165415 ~ 51167174 (+) |
| LOC110501653 | LOC106560673 | other | downstream | 1542197 | 51317121 ~ 51339537 (+) |
| rl28 | rl28 | other | downstream | 1632667 | 51412121 ~ 51417154 (+) |
| G155541 | NA | other | downstream | 1641248 | 51420847 ~ 51421122 (+) |
