Gene
RNA
| Item | Value |
|---|---|
| gene id | G153894 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 49852922 ~ 49853181 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106562530 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU176074 | True | 260 | lncRNA | 0.38 | 1 | 49852922 | 49853181 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490968 | LOC105006464 | coding | downstream | 15875 | 49801952 ~ 49837047 (-) |
| LOC118936760 | NA | coding | downstream | 113676 | 49738842 ~ 49739246 (-) |
| hmg20a | hmg20a | coding | downstream | 377551 | 49451688 ~ 49475371 (-) |
| peak1 | peak1 | coding | downstream | 425639 | 49166669 ~ 49427283 (-) |
| syt12 | syt12 | coding | downstream | 697661 | 49114742 ~ 49155261 (-) |
| LOC110490984 | LOC106560693 | coding | upstream | 109715 | 49962896 ~ 50037892 (-) |
| plscr3a | LOC106560726 | coding | upstream | 271380 | 50124561 ~ 50127403 (-) |
| LOC118937274 | NA | coding | upstream | 276334 | 50129515 ~ 50131269 (-) |
| LOC110491057 | LOC100136935 | coding | upstream | 419037 | 50272218 ~ 50287727 (-) |
| LOC110491068 | larp1 | coding | upstream | 621451 | 50474632 ~ 50561307 (-) |
| G153886 | NA | non-coding | downstream | 13324 | 49838761 ~ 49839598 (-) |
| G153864 | NA | non-coding | downstream | 63305 | 49789395 ~ 49789617 (-) |
| G153863 | NA | non-coding | downstream | 65003 | 49787651 ~ 49787919 (-) |
| G153861 | NA | non-coding | downstream | 67628 | 49784928 ~ 49785294 (-) |
| G153897 | NA | non-coding | upstream | 5270 | 49858451 ~ 49858737 (-) |
| G153903 | NA | non-coding | upstream | 10790 | 49863971 ~ 49864177 (-) |
| G153909 | NA | non-coding | upstream | 20543 | 49873724 ~ 49873959 (-) |
| G153916 | NA | non-coding | upstream | 28389 | 49881570 ~ 49881855 (-) |
| G153936 | NA | non-coding | upstream | 44786 | 49897967 ~ 49898213 (-) |
| G152024 | NA | other | downstream | 1549259 | 48303311 ~ 48303663 (-) |
| G151920 | NA | other | downstream | 1625978 | 48226299 ~ 48226944 (-) |
| G151875 | NA | other | downstream | 1664644 | 48187958 ~ 48188278 (-) |
| G151474 | NA | other | downstream | 2001574 | 47850785 ~ 47851348 (-) |
| G150675 | LOC100653436 | other | downstream | 2647489 | 47194893 ~ 47205433 (-) |
| G154300 | NA | other | upstream | 248249 | 50101430 ~ 50107447 (-) |
| G154338 | NA | other | upstream | 303505 | 50156686 ~ 50157825 (-) |
| G155003 | NA | other | upstream | 562562 | 50415743 ~ 50452147 (-) |
| G155072 | NA | other | upstream | 726617 | 50579798 ~ 50581349 (-) |
| G155281 | LOC106560681 | other | upstream | 1117895 | 50971076 ~ 50971935 (-) |
