G153942


Basic Information

Item Value
gene id G153942
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 49901461 ~ 49901692 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU176122
acaataaacgtgcgaaaacctaaacagcctatctggtgacaaacacaaagacaggaacaatcacccacaaacacacagtgaaacccaggctacctaagtatgattctcaatcagagacaactaatgacacctgcctctgattgagaaccataccaggccgaaacatagaaatacccaaaacatagaaaatcaaacagactgcccacccaactcacgccctggccatactaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU176122 True 232 lncRNA 0.44 1 49901461 49901692

Neighbor

gene id symbol gene type direction distance location
LOC110490948 LOC106560694 coding upstream 134336 49749113 ~ 49767125 (+)
cdkn1cb LOC106560698 coding upstream 1162910 48736519 ~ 48738551 (+)
prr5l prr5l coding upstream 1399581 48481528 ~ 48501880 (+)
fcsk fuk coding upstream 1453674 48394983 ~ 48447787 (+)
LOC110491010 LOC106560692 coding downstream 166517 50068209 ~ 50093310 (+)
LOC110491026 LOC106560691 coding downstream 196695 50098387 ~ 50100624 (+)
LOC110491039 LOC106560690 coding downstream 248769 50150461 ~ 50159171 (+)
LOC110491040 LOC106560688 coding downstream 279608 50181300 ~ 50198685 (+)
LOC110491046 LOC106560687 coding downstream 322046 50223738 ~ 50236226 (+)
G153928 NA non-coding upstream 8730 49892437 ~ 49892731 (+)
G153433 NA non-coding upstream 41662 49859579 ~ 49859799 (+)
G153431 NA non-coding upstream 44283 49856967 ~ 49857178 (+)
G153425 NA non-coding upstream 54965 49846218 ~ 49846496 (+)
G153406 NA non-coding upstream 82279 49799002 ~ 49819182 (+)
G153959 NA non-coding downstream 10920 49912612 ~ 49913003 (+)
G153961 NA non-coding downstream 12286 49913978 ~ 49914184 (+)
G153978 NA non-coding downstream 29697 49931389 ~ 49931615 (+)
G154017 NA non-coding downstream 74651 49976343 ~ 49976611 (+)
G154018 NA non-coding downstream 75685 49977377 ~ 49977588 (+)
G152167 NA other upstream 1343775 48556782 ~ 48557686 (+)
G150997 NA other upstream 2353882 47497948 ~ 47547579 (+)
uevld uevld other upstream 2916235 46981686 ~ 47007672 (+)
G148191 NA other upstream 4409082 45472082 ~ 45492379 (+)
G147510 NA other upstream 5029961 44870800 ~ 44871500 (+)
G154859 NA other downstream 1263723 51165415 ~ 51167174 (+)
LOC110501653 LOC106560673 other downstream 1420104 51317121 ~ 51339537 (+)
rl28 rl28 other downstream 1510574 51412121 ~ 51417154 (+)
G155541 NA other downstream 1519155 51420847 ~ 51421122 (+)

Expression


Co-expression Network