G153959


Basic Information

Item Value
gene id G153959
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 49912612 ~ 49913003 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU176139
atgacgagcttggagggtactatggtgttgaatgccgagctgtagtcgatgaacagcattctcacataggtattcctcttgtccagatgggttagggcagtgtgcagtgtggttgagattgcatcgtctgtggacctatttgggcggtaagcaaattggagtgggtctagggtgtcaggtagggtggaggtgatatggtccttgactagtctctcaaagcacttcacgatgacggaagtgagtgctacggggcggtagttgtttagctcagttaccttagctttcttgggaacaggaacaatggtggccctcttgaagcatgtgggaacagcagactagtaaagggattgattgaatatgtccgtaaacacaccggccagctggtctgcgca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU176139 True 392 lncRNA 0.50 1 49912612 49913003

Neighbor

gene id symbol gene type direction distance location
LOC110490948 LOC106560694 coding upstream 145487 49749113 ~ 49767125 (+)
cdkn1cb LOC106560698 coding upstream 1174061 48736519 ~ 48738551 (+)
prr5l prr5l coding upstream 1410732 48481528 ~ 48501880 (+)
fcsk fuk coding upstream 1464825 48394983 ~ 48447787 (+)
LOC110491010 LOC106560692 coding downstream 155206 50068209 ~ 50093310 (+)
LOC110491026 LOC106560691 coding downstream 185384 50098387 ~ 50100624 (+)
LOC110491039 LOC106560690 coding downstream 237458 50150461 ~ 50159171 (+)
LOC110491040 LOC106560688 coding downstream 268297 50181300 ~ 50198685 (+)
LOC110491046 LOC106560687 coding downstream 310735 50223738 ~ 50236226 (+)
G153942 NA non-coding upstream 10920 49901461 ~ 49901692 (+)
G153928 NA non-coding upstream 19881 49892437 ~ 49892731 (+)
G153433 NA non-coding upstream 52813 49859579 ~ 49859799 (+)
G153431 NA non-coding upstream 55434 49856967 ~ 49857178 (+)
G153425 NA non-coding upstream 66116 49846218 ~ 49846496 (+)
G153961 NA non-coding downstream 975 49913978 ~ 49914184 (+)
G153978 NA non-coding downstream 18386 49931389 ~ 49931615 (+)
G154017 NA non-coding downstream 63340 49976343 ~ 49976611 (+)
G154018 NA non-coding downstream 64374 49977377 ~ 49977588 (+)
G154020 NA non-coding downstream 66758 49979761 ~ 49980056 (+)
G152167 NA other upstream 1354926 48556782 ~ 48557686 (+)
G150997 NA other upstream 2365033 47497948 ~ 47547579 (+)
uevld uevld other upstream 2927386 46981686 ~ 47007672 (+)
G148191 NA other upstream 4420233 45472082 ~ 45492379 (+)
G147510 NA other upstream 5041112 44870800 ~ 44871500 (+)
G154859 NA other downstream 1252412 51165415 ~ 51167174 (+)
LOC110501653 LOC106560673 other downstream 1408793 51317121 ~ 51339537 (+)
rl28 rl28 other downstream 1499263 51412121 ~ 51417154 (+)
G155541 NA other downstream 1507844 51420847 ~ 51421122 (+)

Expression


Co-expression Network