Gene
RNA
| Item | Value |
|---|---|
| gene id | G154249 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 49984745 ~ 49985009 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: extensin-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU176443 | True | 265 | lncRNA | 0.42 | 1 | 49984745 | 49985009 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490968 | LOC105006464 | coding | downstream | 147698 | 49801952 ~ 49837047 (-) |
| LOC118936760 | NA | coding | downstream | 245499 | 49738842 ~ 49739246 (-) |
| hmg20a | hmg20a | coding | downstream | 509374 | 49451688 ~ 49475371 (-) |
| peak1 | peak1 | coding | downstream | 557462 | 49166669 ~ 49427283 (-) |
| syt12 | syt12 | coding | downstream | 829484 | 49114742 ~ 49155261 (-) |
| plscr3a | LOC106560726 | coding | upstream | 139552 | 50124561 ~ 50127403 (-) |
| LOC118937274 | NA | coding | upstream | 144506 | 50129515 ~ 50131269 (-) |
| LOC110491057 | LOC100136935 | coding | upstream | 287209 | 50272218 ~ 50287727 (-) |
| LOC110491068 | larp1 | coding | upstream | 489623 | 50474632 ~ 50561307 (-) |
| rbm41 | rbm41 | coding | upstream | 680287 | 50665296 ~ 50678813 (-) |
| G154241 | NA | non-coding | downstream | 6927 | 49977608 ~ 49977818 (-) |
| G153988 | NA | non-coding | downstream | 44998 | 49939297 ~ 49939747 (-) |
| G153958 | NA | non-coding | downstream | 72753 | 49911571 ~ 49911992 (-) |
| G153957 | NA | non-coding | downstream | 73229 | 49911230 ~ 49911516 (-) |
| G153949 | NA | non-coding | downstream | 77588 | 49906831 ~ 49907157 (-) |
| G154271 | LOC105007919 | non-coding | upstream | 106167 | 50091176 ~ 50093305 (-) |
| G154307 | NA | non-coding | upstream | 131040 | 50116049 ~ 50116251 (-) |
| G154310 | NA | non-coding | upstream | 134311 | 50119320 ~ 50119588 (-) |
| G154313 | NA | non-coding | upstream | 142714 | 50127723 ~ 50127951 (-) |
| G152024 | NA | other | downstream | 1681082 | 48303311 ~ 48303663 (-) |
| G151920 | NA | other | downstream | 1757801 | 48226299 ~ 48226944 (-) |
| G151875 | NA | other | downstream | 1796467 | 48187958 ~ 48188278 (-) |
| G151474 | NA | other | downstream | 2133397 | 47850785 ~ 47851348 (-) |
| G150675 | LOC100653436 | other | downstream | 2779312 | 47194893 ~ 47205433 (-) |
| G154300 | NA | other | upstream | 116421 | 50101430 ~ 50107447 (-) |
| G154338 | NA | other | upstream | 171677 | 50156686 ~ 50157825 (-) |
| G155003 | NA | other | upstream | 430734 | 50415743 ~ 50452147 (-) |
| G155072 | NA | other | upstream | 594789 | 50579798 ~ 50581349 (-) |
| G155281 | LOC106560681 | other | upstream | 986067 | 50971076 ~ 50971935 (-) |
