G154059


Basic Information

Item Value
gene id G154059
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 50036103 ~ 50036380 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU176241
atgtaaatgtgttatttcggGGGTTTATACATTTGCAGAAATTTCTaaagacctgtttttgctttgtcattatggggtattgtgatgtcatcatggggtaatcaattttagaatgaggctgtaacgtaacaaaatgtggaaaaagtcaaggggtctgaatattttctgaatgcactgtattggcTCCATTATTCTATGGCTGAGCTGAGTTGAGCAGTGTGTCCttttgttggatgacatgaaat

Function

NR:

description
conserved oligomeric Golgi complex subunit 4 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU176241 True 245 lncRNA 0.37 2 50036103 50036380

Neighbor

gene id symbol gene type direction distance location
LOC110490948 LOC106560694 coding upstream 268978 49749113 ~ 49767125 (+)
cdkn1cb LOC106560698 coding upstream 1297552 48736519 ~ 48738551 (+)
prr5l prr5l coding upstream 1534223 48481528 ~ 48501880 (+)
fcsk fuk coding upstream 1588316 48394983 ~ 48447787 (+)
LOC110491010 LOC106560692 coding downstream 31829 50068209 ~ 50093310 (+)
LOC110491026 LOC106560691 coding downstream 62007 50098387 ~ 50100624 (+)
LOC110491039 LOC106560690 coding downstream 114081 50150461 ~ 50159171 (+)
LOC110491040 LOC106560688 coding downstream 144920 50181300 ~ 50198685 (+)
LOC110491046 LOC106560687 coding downstream 187358 50223738 ~ 50236226 (+)
G154020 NA non-coding upstream 56047 49979761 ~ 49980056 (+)
G154018 NA non-coding upstream 58515 49977377 ~ 49977588 (+)
G154017 NA non-coding upstream 59492 49976343 ~ 49976611 (+)
G153978 NA non-coding upstream 104488 49931389 ~ 49931615 (+)
G153961 NA non-coding upstream 121919 49913978 ~ 49914184 (+)
G154105 NA non-coding downstream 74569 50110949 ~ 50111262 (+)
G154110 NA non-coding downstream 81925 50118305 ~ 50118642 (+)
G154111 NA non-coding downstream 82367 50118747 ~ 50119001 (+)
G154119 NA non-coding downstream 92479 50128859 ~ 50129073 (+)
G154180 NA non-coding downstream 201097 50237477 ~ 50244279 (+)
G152167 NA other upstream 1478417 48556782 ~ 48557686 (+)
G150997 NA other upstream 2488524 47497948 ~ 47547579 (+)
uevld uevld other upstream 3050877 46981686 ~ 47007672 (+)
G148191 NA other upstream 4543724 45472082 ~ 45492379 (+)
G147510 NA other upstream 5164603 44870800 ~ 44871500 (+)
G154859 NA other downstream 1129035 51165415 ~ 51167174 (+)
LOC110501653 LOC106560673 other downstream 1285416 51317121 ~ 51339537 (+)
rl28 rl28 other downstream 1375886 51412121 ~ 51417154 (+)
G155541 NA other downstream 1384467 51420847 ~ 51421122 (+)

Expression


Co-expression Network