G154110


Basic Information

Item Value
gene id G154110
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 50118305 ~ 50118642 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU176298
atgcaaatgaattacttaaaaatcatacaatgtgattttctggatttttgttttagattccgtctctcacagttgaagtgtacctatgataaaaaatgacagacctctacatgctttgtaagtaggaaaacctgcaaaatcggcagtgtatcaaatacaaatatatatctatatacagtggggcaaaaaagtatttagtcagccaccaattgtgcaagttctccaacttaaaaagatgagagaggcctgtaattttcatcataggtacacttcaactatgacagacaaaatgagaaaaaaaattccagaaaatcacattgtaggatttttaatgaatt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU176298 True 338 lncRNA 0.50 1 50118305 50118642

Neighbor

gene id symbol gene type direction distance location
LOC110491026 LOC106560691 coding upstream 17681 50098387 ~ 50100624 (+)
LOC110491010 LOC106560692 coding upstream 24995 50068209 ~ 50093310 (+)
LOC110490948 LOC106560694 coding upstream 351180 49749113 ~ 49767125 (+)
cdkn1cb LOC106560698 coding upstream 1379754 48736519 ~ 48738551 (+)
prr5l prr5l coding upstream 1616425 48481528 ~ 48501880 (+)
LOC110491039 LOC106560690 coding downstream 31819 50150461 ~ 50159171 (+)
LOC110491040 LOC106560688 coding downstream 62658 50181300 ~ 50198685 (+)
LOC110491046 LOC106560687 coding downstream 105096 50223738 ~ 50236226 (+)
LOC110510939 faxdc2 coding downstream 305491 50424133 ~ 50433556 (+)
LOC110515922 faxdc2 coding downstream 341705 50460347 ~ 50470125 (+)
G154105 NA non-coding upstream 7043 50110949 ~ 50111262 (+)
G154059 NA non-coding upstream 81925 50036103 ~ 50036380 (+)
G154020 NA non-coding upstream 138249 49979761 ~ 49980056 (+)
G154018 NA non-coding upstream 140717 49977377 ~ 49977588 (+)
G154017 NA non-coding upstream 141694 49976343 ~ 49976611 (+)
G154111 NA non-coding downstream 105 50118747 ~ 50119001 (+)
G154119 NA non-coding downstream 10217 50128859 ~ 50129073 (+)
G154180 NA non-coding downstream 118835 50237477 ~ 50244279 (+)
G154199 NA non-coding downstream 140752 50259394 ~ 50259673 (+)
G154204 NA non-coding downstream 147293 50265935 ~ 50266159 (+)
G152167 NA other upstream 1560619 48556782 ~ 48557686 (+)
G150997 NA other upstream 2570726 47497948 ~ 47547579 (+)
uevld uevld other upstream 3133079 46981686 ~ 47007672 (+)
G148191 NA other upstream 4625926 45472082 ~ 45492379 (+)
G154859 NA other downstream 1046773 51165415 ~ 51167174 (+)
LOC110501653 LOC106560673 other downstream 1203154 51317121 ~ 51339537 (+)
rl28 rl28 other downstream 1293624 51412121 ~ 51417154 (+)
G155541 NA other downstream 1302205 51420847 ~ 51421122 (+)
G156000 LOC106560791 other downstream 1697868 51816510 ~ 51824182 (+)

Expression


Co-expression Network