G154199


Basic Information

Item Value
gene id G154199
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 50259394 ~ 50259673 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU176391
ggttaagggcgctgtactgcagcgccagctgtgctatcagagtccctgggttcgcgcccaggctctgtcgtaaccggctgcgaccgggaggtccgtggggcgacacacaattggcctagcgtcgtccgggttagggagggattggtcggtagggatctccttgtctcatcgcgcaccagcgactcctgtggcgggccgggcgcagtgcacgctaaccaaggttgtttcctccgacacattggctgtgttaagaagcagtgctggttgggttgtgtatcgg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU176391 True 280 lncRNA 0.40 1 50259394 50259673

Neighbor

gene id symbol gene type direction distance location
LOC110491046 LOC106560687 coding upstream 23168 50223738 ~ 50236226 (+)
LOC110491040 LOC106560688 coding upstream 60709 50181300 ~ 50198685 (+)
LOC110491039 LOC106560690 coding upstream 100223 50150461 ~ 50159171 (+)
LOC110491026 LOC106560691 coding upstream 158770 50098387 ~ 50100624 (+)
LOC110491010 LOC106560692 coding upstream 166084 50068209 ~ 50093310 (+)
LOC110510939 faxdc2 coding downstream 164460 50424133 ~ 50433556 (+)
LOC110515922 faxdc2 coding downstream 200674 50460347 ~ 50470125 (+)
zgc:56585 pgdh coding downstream 315743 50575416 ~ 50580216 (+)
LOC110491108 NA coding downstream 419141 50678814 ~ 50689147 (+)
LOC110491126 LOC106602822 coding downstream 457907 50717580 ~ 50884089 (+)
G154180 NA non-coding upstream 15115 50237477 ~ 50244279 (+)
G154119 NA non-coding upstream 130321 50128859 ~ 50129073 (+)
G154111 NA non-coding upstream 140393 50118747 ~ 50119001 (+)
G154110 NA non-coding upstream 140752 50118305 ~ 50118642 (+)
G154105 NA non-coding upstream 148132 50110949 ~ 50111262 (+)
G154204 NA non-coding downstream 6262 50265935 ~ 50266159 (+)
G154431 NA non-coding downstream 45200 50304873 ~ 50397242 (+)
G154487 NA non-coding downstream 120663 50380336 ~ 50447003 (+)
G154514 NA non-coding downstream 156595 50416268 ~ 50452563 (+)
G154517 NA non-coding downstream 182332 50442005 ~ 50444553 (+)
G152167 NA other upstream 1701708 48556782 ~ 48557686 (+)
G150997 NA other upstream 2711815 47497948 ~ 47547579 (+)
uevld uevld other upstream 3274168 46981686 ~ 47007672 (+)
G148191 NA other upstream 4767015 45472082 ~ 45492379 (+)
G154859 NA other downstream 905742 51165415 ~ 51167174 (+)
LOC110501653 LOC106560673 other downstream 1062123 51317121 ~ 51339537 (+)
rl28 rl28 other downstream 1152593 51412121 ~ 51417154 (+)
G155541 NA other downstream 1161174 51420847 ~ 51421122 (+)
G156000 LOC106560791 other downstream 1556837 51816510 ~ 51824182 (+)

Expression


Co-expression Network