G154487


Basic Information

Item Value
gene id G154487
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 50380336 ~ 50447003 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU176730
gaatccaatcgagaatctgtggaaagaactgaaaactgctgttcacaaatgctcaccatccaacctcactgagctcgagctgttttgcaaggaggaatgggaaaacatttcagtctctcgatgtgcaaaactgatagagacataccccaagcgacttacagctgtaatcgcagcaaaaggtggcgctagaaagtattaacttaagggggctgaataattttgcacgcccaatttttcagtttttgatttgttaaaaaagtttgaaatatccaataaatgtcgttccacttcatgattgtgtcccacttgttgttgattcttcacaaaaaaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU176730 True 332 lncRNA 0.39 2 50380336 50447003

Neighbor

gene id symbol gene type direction distance location
LOC110491046 LOC106560687 coding upstream 144110 50223738 ~ 50236226 (+)
LOC110491040 LOC106560688 coding upstream 181651 50181300 ~ 50198685 (+)
LOC110491039 LOC106560690 coding upstream 221165 50150461 ~ 50159171 (+)
LOC110491026 LOC106560691 coding upstream 279712 50098387 ~ 50100624 (+)
LOC110491010 LOC106560692 coding upstream 287026 50068209 ~ 50093310 (+)
LOC110515922 faxdc2 coding downstream 13344 50460347 ~ 50470125 (+)
zgc:56585 pgdh coding downstream 128413 50575416 ~ 50580216 (+)
LOC110491108 NA coding downstream 231811 50678814 ~ 50689147 (+)
LOC110491126 LOC106602822 coding downstream 270577 50717580 ~ 50884089 (+)
LOC110491193 LOC106560681 coding downstream 513128 50960131 ~ 50972173 (+)
G154204 NA non-coding upstream 114177 50265935 ~ 50266159 (+)
G154199 NA non-coding upstream 120663 50259394 ~ 50259673 (+)
G154180 NA non-coding upstream 136057 50237477 ~ 50244279 (+)
G154119 NA non-coding upstream 251263 50128859 ~ 50129073 (+)
G154111 NA non-coding upstream 261335 50118747 ~ 50119001 (+)
G154524 NA non-coding downstream 30885 50477888 ~ 50479523 (+)
G154525 NA non-coding downstream 31437 50478440 ~ 50488294 (+)
G154526 NA non-coding downstream 31709 50478712 ~ 50480108 (+)
G154527 NA non-coding downstream 31777 50478780 ~ 50487600 (+)
G154548 NA non-coding downstream 62278 50509281 ~ 50509791 (+)
G152167 NA other upstream 1822650 48556782 ~ 48557686 (+)
G150997 NA other upstream 2832757 47497948 ~ 47547579 (+)
uevld uevld other upstream 3395110 46981686 ~ 47007672 (+)
G148191 NA other upstream 4887957 45472082 ~ 45492379 (+)
G154859 NA other downstream 718412 51165415 ~ 51167174 (+)
LOC110501653 LOC106560673 other downstream 874793 51317121 ~ 51339537 (+)
rl28 rl28 other downstream 965263 51412121 ~ 51417154 (+)
G155541 NA other downstream 973844 51420847 ~ 51421122 (+)
G156000 LOC106560791 other downstream 1369507 51816510 ~ 51824182 (+)

Expression


Co-expression Network