G154514


Basic Information

Item Value
gene id G154514
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 50416268 ~ 50452563 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU176760
cacagtacggacatggcaatttattgccctggccacatctgcagtcctcatgcctccttgtagcatgcctaaggcccgttcacacagatgagcagggaccctgggcatctttcttttggtgtatttcagagtcagtagaaaggcctctttagtgtcctaagttttcataactgtaatagcctaccgtctgtaagctgttagtgtcttaacgaccgttccacaggtgcatgtccaTTAATTATGATTCATTGAACATTCATAGGAAACCGtttttaaacct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU176760 True 280 lncRNA 0.45 2 50416268 50452563

Neighbor

gene id symbol gene type direction distance location
LOC110491046 LOC106560687 coding upstream 180042 50223738 ~ 50236226 (+)
LOC110491040 LOC106560688 coding upstream 217583 50181300 ~ 50198685 (+)
LOC110491039 LOC106560690 coding upstream 257097 50150461 ~ 50159171 (+)
LOC110491026 LOC106560691 coding upstream 315644 50098387 ~ 50100624 (+)
LOC110491010 LOC106560692 coding upstream 322958 50068209 ~ 50093310 (+)
LOC110515922 faxdc2 coding downstream 7784 50460347 ~ 50470125 (+)
zgc:56585 pgdh coding downstream 122853 50575416 ~ 50580216 (+)
LOC110491108 NA coding downstream 226251 50678814 ~ 50689147 (+)
LOC110491126 LOC106602822 coding downstream 265017 50717580 ~ 50884089 (+)
LOC110491193 LOC106560681 coding downstream 507568 50960131 ~ 50972173 (+)
G154431 NA non-coding upstream 19026 50304873 ~ 50397242 (+)
G154204 NA non-coding upstream 150109 50265935 ~ 50266159 (+)
G154199 NA non-coding upstream 156595 50259394 ~ 50259673 (+)
G154180 NA non-coding upstream 171989 50237477 ~ 50244279 (+)
G154119 NA non-coding upstream 287195 50128859 ~ 50129073 (+)
G154524 NA non-coding downstream 25325 50477888 ~ 50479523 (+)
G154525 NA non-coding downstream 25877 50478440 ~ 50488294 (+)
G154526 NA non-coding downstream 26149 50478712 ~ 50480108 (+)
G154527 NA non-coding downstream 26217 50478780 ~ 50487600 (+)
G154548 NA non-coding downstream 56718 50509281 ~ 50509791 (+)
G152167 NA other upstream 1858582 48556782 ~ 48557686 (+)
G150997 NA other upstream 2868689 47497948 ~ 47547579 (+)
uevld uevld other upstream 3431042 46981686 ~ 47007672 (+)
G148191 NA other upstream 4923889 45472082 ~ 45492379 (+)
G154859 NA other downstream 712852 51165415 ~ 51167174 (+)
LOC110501653 LOC106560673 other downstream 869233 51317121 ~ 51339537 (+)
rl28 rl28 other downstream 959703 51412121 ~ 51417154 (+)
G155541 NA other downstream 968284 51420847 ~ 51421122 (+)
G156000 LOC106560791 other downstream 1363947 51816510 ~ 51824182 (+)

Expression


Co-expression Network