G155011


Basic Information

Item Value
gene id G155011
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 50438553 ~ 50440990 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU177328
GAGGAGGGAGGTCGCAAGAGACACTCATCCAGCGGAGACTGTCGCCGCCGCCACCCCTCCCAGGGCTCCAGCCGCCCCCACAGCCAAACTGGCTTCGGCCCCGTTCGCCCAGGGCCCCACCAGGGAGGATGCCAAAATCAGCAGCCAGAGCCAGCGCCCCGCAGCCCAGACGGGGCGCTGCCACCAAAGTAACCCCAGACAACCCTCAGCCACTTGGATCAACTCAACGTCATTGAATATTTTCTGCGCCGCAAGAATGAGAGAATGACTTTCTGACGAACAGCTTGTGATTTGAATAAATCAAGGCTCTTCCATTTTGATTTATTTAGTTTTGAAACACCCAGCGTTTTGACTTATTAGAGACGAAACTGAATGACTATTGAAGGAGTGGATGAAGTATATTTTCTCGCGTGGTTACAATGTGGGGAATTGACATGGTTTCTGAGGACGTTTGATGGCAACTGCGAACCTTGTGATTCCTTTCTGTTGATGGACCCTCTTTCCACTTGACACCATCTAGTTGGTGGATTAGAAATGTATGCGttgaaaaatacatatttaactTGTTTTGcgcgagagagaaatagagggagaaaaaAATTGATGTCAAAACCAAACCAAATGATGAAAAAAAATGACTTGTACCAGTCCCTCAGTATGAACAAGATCATTGAAAGTTGCCTTATTTTTATGTTTTTCCTGCTTTACTTGTGCCCGGCACCGTAATGTCGATTGTACAGCATTGACAATTGCAAATATGCAACATTGGTCAGCACCTACAGTAGTGGCCACTCAGTGACTCCCTGCCTGCCAAACAGTTCTGAATGCAACCTGCTGAATGAACTGTCTTCCAAGTGTCAggtTTATCAGTAGATCTGGTGTTCTGCGATGGTTGCTTTGGGGAGATGTGCGGCGGGTTATGTTCTGCTTCCCAGGGCTAAACAAGGCAGGGTTTCAGTTTGCAGCTTAGCATGGCCTATAACATTGCATCCCACCAGtgcttccacacacacacccctcgtATGTTTTTTTCCAGAGGCTCTACTCTGTTCATCTGGAGGAGTATAACCAATGGACAGACGGTCTCCCTTCTGACCCCTGAACTCAACCCACCTGTTCTATTCCCATGAACATCTGACTACATACAGTCAGATAAACTATAATAATCTGGTGTGGATAACATCATCTTCATCCGACAGAGGACTGATGATATCAAATAGATGAGTGATTCATTTTTTCTTCACCAATGTGAATTGGACAGAAGATAACTTTCACCTCCAGGCGACTTGTTTTATTGTTTATAGAACAGTTTATATATTCGACTTGCATGTGTACAtacttctttttctttttttaaatggtctgaAATGAGGCCTTTTTTTATTTGCTGTGTTTCTAGCTATGCTATGGGTATATGGTCCTCTTTAGTTCAATATCAATTGGCATAAATAACAGAACTGTTCCTTCTGCTGGAGGTTGAGAAGGGATTCATATTCACAGGTGGTTCCGCTGTGTCAAAATTTAAAACAAACATGAAGACATTGGCCATTATATTTTCATTAACTGTCATTGTTGAAAAAGTTGAGTTTTTACGAGAATTAACTTTCTTTTTTAACTTTTTCCCCCCCTGTCTTGTGGGTTTAACTCAAGGGAACTGTGAGTCAATTGAGTGTGCTTGTATGATTGATTGAATCACTCAAGAAATTGTTTACTCGAGGAATAAAGACATGACTTTCCGAATGCACCCCCAGTGAATGTCCCCTCTCACTCCTCCTAGACCAGGATAGAGGGGACAGGTAAGACCTGTCCTTTGGGGTCCAGTCTAATCGTTAGCACAGTGCATCAGACCCTGTGGTTGGAACTGTTGGTGCTCCAATGAACTCAGCAGGACACCAGGCATGGCGCCCCCTAGTGTCAGGTGGACTGGcgagaaagaggggaagggaggacgTAACCCACTTTGGGTTTGTCAATATTCAGAGGTTATGAATGGCTATGATGTCTGGGGACTGAAAAAAAAGGACAAAATTCCATAAagccaaataaatgaagatagcTGTATATGAACCATAGATTTTTTTAATAGTTCATTACCATTACAATATCCTAGGCTTGTCATGAGGGAgactaaaataataaaaacaaatgtaaaatactTGAATGAGATCTTGTATTATAGCATTTAATATCCATAATATCTGCTTTGTAGGCTGTGATTTGCTATTGGTGTTATTTGTAGTAATTGTGCTGTTCCTTATATA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU177328 True 2261 lncRNA 0.43 2 50438553 50440990

Neighbor

gene id symbol gene type direction distance location
LOC110491057 LOC100136935 coding downstream 150826 50272218 ~ 50287727 (-)
LOC118937274 NA coding downstream 307570 50129515 ~ 50131269 (-)
plscr3a LOC106560726 coding downstream 311150 50124561 ~ 50127403 (-)
LOC110490984 LOC106560693 coding downstream 400661 49962896 ~ 50037892 (-)
LOC110490968 LOC105006464 coding downstream 601506 49801952 ~ 49837047 (-)
LOC110491068 larp1 coding upstream 33642 50474632 ~ 50561307 (-)
rbm41 rbm41 coding upstream 224306 50665296 ~ 50678813 (-)
LOC110491182 LOC106602821 coding upstream 465646 50906636 ~ 50954275 (-)
LOC110491226 NA coding upstream 543142 50984132 ~ 50984985 (-)
LOC110491241 LOC106560679 coding upstream 600947 51039870 ~ 51050197 (-)
G155009 NA non-coding downstream 8493 50429551 ~ 50430060 (-)
G154430 NA non-coding downstream 134404 50301824 ~ 50304149 (-)
G154355 NA non-coding downstream 241571 50178803 ~ 50196982 (-)
G154316 NA non-coding downstream 306755 50131515 ~ 50131798 (-)
G155042 NA non-coding upstream 83226 50524216 ~ 50524480 (-)
G155060 NA non-coding upstream 121786 50562776 ~ 50563027 (-)
G155064 NA non-coding upstream 129376 50570366 ~ 50570567 (-)
G155070 NA non-coding upstream 133971 50574961 ~ 50575278 (-)
G155073 NA non-coding upstream 146410 50587400 ~ 50587940 (-)
G154338 NA other downstream 280728 50156686 ~ 50157825 (-)
G154300 NA other downstream 331106 50101430 ~ 50107447 (-)
G152024 NA other downstream 2134890 48303311 ~ 48303663 (-)
G151920 NA other downstream 2211609 48226299 ~ 48226944 (-)
G151875 NA other downstream 2250275 48187958 ~ 48188278 (-)
G155072 NA other upstream 138808 50579798 ~ 50581349 (-)
G155281 LOC106560681 other upstream 530086 50971076 ~ 50971935 (-)
G155610 NA other upstream 971279 51412269 ~ 51417110 (-)
snx33 snx33 other upstream 2591912 53032902 ~ 53112547 (-)

Expression


Co-expression Network