G154548


Basic Information

Item Value
gene id G154548
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 50509281 ~ 50509791 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU176803
agaaagccccttggtaataaccaggtccagagtatggctgtggttatgggtgggcccagtagaaagccccttggtaataaccaggtccagagtatggctgtggttatgggtgggcccagtagaaagccccttggtaataaccaggtccagagtatggctgtggttatgggtgggcccagtagaaagctccttggtaataaccaggtccaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU176803 True 211 lncRNA 0.52 2 50509281 50509791

Neighbor

gene id symbol gene type direction distance location
LOC110515922 faxdc2 coding upstream 39156 50460347 ~ 50470125 (+)
LOC110510939 faxdc2 coding upstream 75725 50424133 ~ 50433556 (+)
LOC110491046 LOC106560687 coding upstream 273055 50223738 ~ 50236226 (+)
LOC110491040 LOC106560688 coding upstream 310596 50181300 ~ 50198685 (+)
LOC110491039 LOC106560690 coding upstream 350110 50150461 ~ 50159171 (+)
zgc:56585 pgdh coding downstream 65625 50575416 ~ 50580216 (+)
LOC110491108 NA coding downstream 169023 50678814 ~ 50689147 (+)
LOC110491126 LOC106602822 coding downstream 207789 50717580 ~ 50884089 (+)
LOC110491193 LOC106560681 coding downstream 450340 50960131 ~ 50972173 (+)
sat2b sat2 coding downstream 473167 50982958 ~ 51008552 (+)
G154525 NA non-coding upstream 20987 50478440 ~ 50488294 (+)
G154527 NA non-coding upstream 21681 50478780 ~ 50487600 (+)
G154526 NA non-coding upstream 29173 50478712 ~ 50480108 (+)
G154524 NA non-coding upstream 29758 50477888 ~ 50479523 (+)
G154514 NA non-coding upstream 56718 50416268 ~ 50452563 (+)
G154579 NA non-coding downstream 52914 50562705 ~ 50562989 (+)
G154580 LOC108238713 non-coding downstream 54092 50563883 ~ 50564185 (+)
G154582 NA non-coding downstream 57032 50566823 ~ 50567119 (+)
G154583 NA non-coding downstream 57886 50567677 ~ 50567985 (+)
G154584 NA non-coding downstream 58533 50568324 ~ 50568755 (+)
LOC110491026 LOC106560691 other upstream 408807 50098387 ~ 50100624 (+)
G152167 NA other upstream 1951595 48556782 ~ 48557686 (+)
G150997 NA other upstream 2961702 47497948 ~ 47547579 (+)
uevld uevld other upstream 3524055 46981686 ~ 47007672 (+)
G148191 NA other upstream 5016902 45472082 ~ 45492379 (+)
G154859 NA other downstream 655624 51165415 ~ 51167174 (+)
LOC110501653 LOC106560673 other downstream 812005 51317121 ~ 51339537 (+)
rl28 rl28 other downstream 902475 51412121 ~ 51417154 (+)
G155541 NA other downstream 911056 51420847 ~ 51421122 (+)
G156000 LOC106560791 other downstream 1306719 51816510 ~ 51824182 (+)

Expression


Co-expression Network