Gene
RNA
| Item | Value |
|---|---|
| gene id | G155070 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 50574961 ~ 50575278 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: coiled-coil domain-containing protein 112 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU177394 | True | 318 | lncRNA | 0.43 | 1 | 50574961 | 50575278 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110491068 | larp1 | coding | downstream | 13654 | 50474632 ~ 50561307 (-) |
| LOC110491057 | LOC100136935 | coding | downstream | 287234 | 50272218 ~ 50287727 (-) |
| LOC118937274 | NA | coding | downstream | 443978 | 50129515 ~ 50131269 (-) |
| plscr3a | LOC106560726 | coding | downstream | 447558 | 50124561 ~ 50127403 (-) |
| LOC110490984 | LOC106560693 | coding | downstream | 537069 | 49962896 ~ 50037892 (-) |
| rbm41 | rbm41 | coding | upstream | 90018 | 50665296 ~ 50678813 (-) |
| LOC110491182 | LOC106602821 | coding | upstream | 331358 | 50906636 ~ 50954275 (-) |
| LOC110491226 | NA | coding | upstream | 408854 | 50984132 ~ 50984985 (-) |
| LOC110491241 | LOC106560679 | coding | upstream | 466659 | 51039870 ~ 51050197 (-) |
| LOC110491276 | LOC106560676 | coding | upstream | 605492 | 51180770 ~ 51229329 (-) |
| G155064 | NA | non-coding | downstream | 4394 | 50570366 ~ 50570567 (-) |
| G155060 | NA | non-coding | downstream | 11934 | 50562776 ~ 50563027 (-) |
| G155042 | NA | non-coding | downstream | 50481 | 50524216 ~ 50524480 (-) |
| G155012 | NA | non-coding | downstream | 104842 | 50432609 ~ 50470119 (-) |
| G155013 | NA | non-coding | downstream | 106568 | 50431801 ~ 50468393 (-) |
| G155073 | NA | non-coding | upstream | 12122 | 50587400 ~ 50587940 (-) |
| G155074 | NA | non-coding | upstream | 14673 | 50589951 ~ 50592550 (-) |
| G155075 | NA | non-coding | upstream | 18609 | 50593887 ~ 50594414 (-) |
| G155076 | NA | non-coding | upstream | 20874 | 50596152 ~ 50596412 (-) |
| G155077 | NA | non-coding | upstream | 21602 | 50596880 ~ 50597105 (-) |
| G155003 | NA | other | downstream | 122814 | 50415743 ~ 50452147 (-) |
| G154338 | NA | other | downstream | 417136 | 50156686 ~ 50157825 (-) |
| G154300 | NA | other | downstream | 467514 | 50101430 ~ 50107447 (-) |
| G152024 | NA | other | downstream | 2271298 | 48303311 ~ 48303663 (-) |
| G151920 | NA | other | downstream | 2348017 | 48226299 ~ 48226944 (-) |
| G155072 | NA | other | upstream | 4520 | 50579798 ~ 50581349 (-) |
| G155281 | LOC106560681 | other | upstream | 395798 | 50971076 ~ 50971935 (-) |
| G155610 | NA | other | upstream | 836991 | 51412269 ~ 51417110 (-) |
| snx33 | snx33 | other | upstream | 2457624 | 53032902 ~ 53112547 (-) |
