G154591


Basic Information

Item Value
gene id G154591
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 50599718 ~ 50600151 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU176846
TGGGTATTCAATGTACAACAGTAGTCTTCTGTAACAAGCAATACGTGTTAAATATGTTTACATCCAGGACTGAATGGTTTCAAAAACTATTTTAAAGGTTTTGAAAGCAAGTTGTAACAGACCTGATTCAGCAGTCTGAATGATCCTAGTGACACCAAAACATCAATGTTTAGAGAAGCTTGGAGATGATTACACAAGTAAGGGGCAAAGTGCTTATTTACCTAACTCGGTATCTCTGTACAAACCAAAATCATTTCCAGAGCTAGCAATCCCTGAGACTGTGTATGATAACTCCGACTCAAACATCTAATGGTTATTGTagatgacaaataaactttgatttgatttgacatgtgcgctgaatacaacaggtatagtagaccttacagtgaaatgcttacttacaggctctaaccaacagtgcaaaaaaaagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU176846 True 434 lncRNA 0.37 1 50599718 50600151

Neighbor

gene id symbol gene type direction distance location
zgc:56585 pgdh coding upstream 19502 50575416 ~ 50580216 (+)
LOC110515922 faxdc2 coding upstream 129593 50460347 ~ 50470125 (+)
LOC110510939 faxdc2 coding upstream 166162 50424133 ~ 50433556 (+)
LOC110491046 LOC106560687 coding upstream 363492 50223738 ~ 50236226 (+)
LOC110491040 LOC106560688 coding upstream 401033 50181300 ~ 50198685 (+)
LOC110491108 NA coding downstream 78663 50678814 ~ 50689147 (+)
LOC110491126 LOC106602822 coding downstream 117429 50717580 ~ 50884089 (+)
LOC110491193 LOC106560681 coding downstream 359980 50960131 ~ 50972173 (+)
sat2b sat2 coding downstream 382807 50982958 ~ 51008552 (+)
LOC110491259 LOC106560678 coding downstream 467340 51067491 ~ 51087131 (+)
G154592 NA non-coding upstream 10995 50588429 ~ 50588723 (+)
G154594 NA non-coding upstream 12129 50587274 ~ 50587589 (+)
G154593 NA non-coding upstream 13529 50585533 ~ 50586189 (+)
G154584 NA non-coding upstream 30963 50568324 ~ 50568755 (+)
G154583 NA non-coding upstream 31733 50567677 ~ 50567985 (+)
G154662 NA non-coding downstream 132754 50732905 ~ 50733216 (+)
G154663 NA non-coding downstream 133338 50733489 ~ 50783570 (+)
G154664 NA non-coding downstream 133472 50733623 ~ 50735681 (+)
G154669 NA non-coding downstream 156820 50756971 ~ 50778278 (+)
G154679 NA non-coding downstream 186206 50786357 ~ 50786953 (+)
LOC110491026 LOC106560691 other upstream 499244 50098387 ~ 50100624 (+)
G152167 NA other upstream 2042032 48556782 ~ 48557686 (+)
G150997 NA other upstream 3052139 47497948 ~ 47547579 (+)
uevld uevld other upstream 3614492 46981686 ~ 47007672 (+)
G148191 NA other upstream 5107339 45472082 ~ 45492379 (+)
G154859 NA other downstream 565264 51165415 ~ 51167174 (+)
LOC110501653 LOC106560673 other downstream 721645 51317121 ~ 51339537 (+)
rl28 rl28 other downstream 812115 51412121 ~ 51417154 (+)
G155541 NA other downstream 820696 51420847 ~ 51421122 (+)
G156000 LOC106560791 other downstream 1216359 51816510 ~ 51824182 (+)

Expression


Co-expression Network