Gene
RNA
| Item | Value |
|---|---|
| gene id | G155080 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 50602113 ~ 50602426 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU177404 | True | 314 | lncRNA | 0.40 | 1 | 50602113 | 50602426 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110491068 | larp1 | coding | downstream | 40806 | 50474632 ~ 50561307 (-) |
| LOC110491057 | LOC100136935 | coding | downstream | 314386 | 50272218 ~ 50287727 (-) |
| LOC118937274 | NA | coding | downstream | 471130 | 50129515 ~ 50131269 (-) |
| plscr3a | LOC106560726 | coding | downstream | 474710 | 50124561 ~ 50127403 (-) |
| LOC110490984 | LOC106560693 | coding | downstream | 564221 | 49962896 ~ 50037892 (-) |
| rbm41 | rbm41 | coding | upstream | 62870 | 50665296 ~ 50678813 (-) |
| LOC110491182 | LOC106602821 | coding | upstream | 304210 | 50906636 ~ 50954275 (-) |
| LOC110491226 | NA | coding | upstream | 381706 | 50984132 ~ 50984985 (-) |
| LOC110491241 | LOC106560679 | coding | upstream | 439511 | 51039870 ~ 51050197 (-) |
| LOC110491276 | LOC106560676 | coding | upstream | 578344 | 51180770 ~ 51229329 (-) |
| G155079 | NA | non-coding | downstream | 61 | 50601839 ~ 50602052 (-) |
| G155078 | NA | non-coding | downstream | 4317 | 50597503 ~ 50597796 (-) |
| G155077 | NA | non-coding | downstream | 5008 | 50596880 ~ 50597105 (-) |
| G155076 | NA | non-coding | downstream | 5701 | 50596152 ~ 50596412 (-) |
| G155075 | NA | non-coding | downstream | 7699 | 50593887 ~ 50594414 (-) |
| G155081 | NA | non-coding | upstream | 164 | 50602590 ~ 50602989 (-) |
| G155082 | NA | non-coding | upstream | 780 | 50603206 ~ 50603720 (-) |
| G155083 | NA | non-coding | upstream | 1763 | 50604189 ~ 50604404 (-) |
| G155117 | NA | non-coding | upstream | 69382 | 50671808 ~ 50672600 (-) |
| G155122 | NA | non-coding | upstream | 80934 | 50683360 ~ 50684713 (-) |
| G155072 | NA | other | downstream | 20764 | 50579798 ~ 50581349 (-) |
| G155003 | NA | other | downstream | 149966 | 50415743 ~ 50452147 (-) |
| G154338 | NA | other | downstream | 444288 | 50156686 ~ 50157825 (-) |
| G154300 | NA | other | downstream | 494666 | 50101430 ~ 50107447 (-) |
| G152024 | NA | other | downstream | 2298450 | 48303311 ~ 48303663 (-) |
| G155281 | LOC106560681 | other | upstream | 368650 | 50971076 ~ 50971935 (-) |
| G155610 | NA | other | upstream | 809843 | 51412269 ~ 51417110 (-) |
| snx33 | snx33 | other | upstream | 2430476 | 53032902 ~ 53112547 (-) |
| G159120 | NA | other | upstream | 3254260 | 53856686 ~ 53857552 (-) |
