G155122


Basic Information

Item Value
gene id G155122
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 50683360 ~ 50684713 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU177450
CTGCAAGGTCTTTGGCACAGTTCATTAATACAGGAAGATCCAGTATATCTTGAATACATTATTTGACTTTGAGTATATGTGACGGCAGGTAATTAAAGTGAACTGTGTATTAGGTAATTACAGTGAACTGTGTATGAGGTAATTACAGTGAACTGTGTATGAGGTAATTACAGTGAACTGTGTATGAGGTAATTACAGTGAACTGTGTATGTGGTAATTACAGGGAACTGTGTATGAGGTAATTACAATGAACTGTGTATGAGGTAATTACAGTGAACTGTGTATAAAGTTGCATTAACATCATTTGATTGATTTACACTATCAAATTGGAGCCATGAGGATATTTAAGGCCAACAGGGGTTAATTCATCACCCAGGAGACGGTGTTTCCTGTCACACACTGAGGGATGAACATATGAACTGTGTCTCAAGGCCTCCCAAGTGTTAGAAATCTGACAGTAGACGGGCAGTGCAGCCATTTGACCCTTGAACTCTCCTGTCCCGTCTGT
>TU177451
CTGCAAGGTCTTTGGCACAGTTCATTAATACAGGAAGATCCAGTATATCTTGAATACATTATTTGACTTTGAGTATATGTGACGGCAGGTAATTAAAGTGAACTGTGTATTAGGTAATTACAGTGAACTGTGTATGAGGTAATTACAGTGAACTGTGTATGAGGTAATTACAGTGAACTGTGTATTAGGTAATTACAATGAACTGTGTATGAGGTAATTACAGTGAACTGTATGAGGTAATTACAGTGAACTGTGTATGAGGTAATTACAGCGAACTGTGTATGAGGtaattacagtgaactgtttataAGGTAATTACAGTGAACTGTGTATGAGGTCATTACAGTGAACTGAGTATGAGGTAATTACAGTGAACTGTGTATTAGGTAATTACAGTGAACTGTGTATTAGGTAATTACAGTGAACTGTGTATAAGGTAATTACAGTGAACTGTGTATGAGGTAATTACAGTGAACTGTGTATAAGGTAATTACAGTGAACTGTGTATAAGGTAATTACAGTGAACTGTGTATTAGGTAATTACAATGAACTGTGTATAAGGTAATTACAGTGAACTGTGTATGTGGTAATTACAGGGAACTGTGTATGAGGTAATTACAATGAACTGTGTATGAGGTAATTACAGTGAACTGTGTATAAAGTTGCATTAACATCATTTGATTGATTTACACTATCAAATTGGAGCCATGAGGATATTTAAGGCCAACAGGGGTTAATTCATCACCCAGGAGACGGTGTTTCCTGTCACACACTGAGGGATGAACATATGAACTGTGTCTCAAGGCCTCCCAAGTGTTAGAAATCTGACAGTAGACGGGCAGTGCAGCCATTTGACCCTTGAACTCTCCTGTCCCGTCTGT

Function

NR:

description
hypothetical protein EH28_06559

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU177450 False 508 lncRNA 0.41 2 50683360 50684713
TU177451 True 881 lncRNA 0.37 3 50683360 50684713

Neighbor

gene id symbol gene type direction distance location
rbm41 rbm41 coding downstream 4547 50665296 ~ 50678813 (-)
LOC110491068 larp1 coding downstream 122053 50474632 ~ 50561307 (-)
LOC110491057 LOC100136935 coding downstream 395633 50272218 ~ 50287727 (-)
LOC118937274 NA coding downstream 552377 50129515 ~ 50131269 (-)
plscr3a LOC106560726 coding downstream 555957 50124561 ~ 50127403 (-)
LOC110491182 LOC106602821 coding upstream 221923 50906636 ~ 50954275 (-)
LOC110491226 NA coding upstream 299419 50984132 ~ 50984985 (-)
LOC110491241 LOC106560679 coding upstream 357224 51039870 ~ 51050197 (-)
LOC110491276 LOC106560676 coding upstream 496057 51180770 ~ 51229329 (-)
lingo1a LOC106560791 coding upstream 1137578 51822291 ~ 52089547 (-)
G155117 NA non-coding downstream 10760 50671808 ~ 50672600 (-)
G155083 NA non-coding downstream 78956 50604189 ~ 50604404 (-)
G155082 NA non-coding downstream 79640 50603206 ~ 50603720 (-)
G155081 NA non-coding downstream 80371 50602590 ~ 50602989 (-)
G155080 NA non-coding downstream 80934 50602113 ~ 50602426 (-)
G155160 NA non-coding upstream 45957 50730670 ~ 50730937 (-)
G155161 NA non-coding upstream 48191 50732904 ~ 50733219 (-)
G155162 NA non-coding upstream 48571 50733284 ~ 50733486 (-)
G155181 NA non-coding upstream 119524 50804237 ~ 50805476 (-)
G155214 NA non-coding upstream 154002 50838715 ~ 50840230 (-)
G155072 NA other downstream 102011 50579798 ~ 50581349 (-)
G155003 NA other downstream 231213 50415743 ~ 50452147 (-)
G154338 NA other downstream 525535 50156686 ~ 50157825 (-)
G154300 NA other downstream 575913 50101430 ~ 50107447 (-)
G152024 NA other downstream 2379697 48303311 ~ 48303663 (-)
G155281 LOC106560681 other upstream 286363 50971076 ~ 50971935 (-)
G155610 NA other upstream 727556 51412269 ~ 51417110 (-)
snx33 snx33 other upstream 2348189 53032902 ~ 53112547 (-)
G159120 NA other upstream 3171973 53856686 ~ 53857552 (-)

Expression


Co-expression Network