G154662


Basic Information

Item Value
gene id G154662
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 50732905 ~ 50733216 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU176919
attatatggtgaacacagtgatcaggctggttccaggctaggttataccctggacattatatggtgaacacagtgatcaggctggtgccaccaggctaggttataccctggacattatatggtgaacacagtgatcaggctggttgcatcaggctaggttataacctggacattatatggtgaacacagtgatcaggctggttccaggctaggttataccctggacattatatggtgaacacagtgatcaggctggtgccaccaggctaggttataccctggacattatatggtgaacacagtgatcaggct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU176919 True 312 lncRNA 0.47 1 50732905 50733216

Neighbor

gene id symbol gene type direction distance location
LOC110491108 NA coding upstream 43758 50678814 ~ 50689147 (+)
zgc:56585 pgdh coding upstream 152689 50575416 ~ 50580216 (+)
LOC110515922 faxdc2 coding upstream 262780 50460347 ~ 50470125 (+)
LOC110510939 faxdc2 coding upstream 299349 50424133 ~ 50433556 (+)
LOC110491046 LOC106560687 coding upstream 496679 50223738 ~ 50236226 (+)
LOC110491193 LOC106560681 coding downstream 226915 50960131 ~ 50972173 (+)
sat2b sat2 coding downstream 249742 50982958 ~ 51008552 (+)
LOC110491259 LOC106560678 coding downstream 334275 51067491 ~ 51087131 (+)
LOC118944166 NA coding downstream 361507 51094723 ~ 51094847 (+)
LOC110491269 LOC106560677 coding downstream 380991 51114207 ~ 51136900 (+)
G154591 NA non-coding upstream 132754 50599718 ~ 50600151 (+)
G154592 NA non-coding upstream 144182 50588429 ~ 50588723 (+)
G154594 NA non-coding upstream 145316 50587274 ~ 50587589 (+)
G154593 NA non-coding upstream 146716 50585533 ~ 50586189 (+)
G154584 NA non-coding upstream 164150 50568324 ~ 50568755 (+)
G154663 NA non-coding downstream 273 50733489 ~ 50783570 (+)
G154664 NA non-coding downstream 407 50733623 ~ 50735681 (+)
G154669 NA non-coding downstream 23755 50756971 ~ 50778278 (+)
G154679 NA non-coding downstream 53141 50786357 ~ 50786953 (+)
G154684 NA non-coding downstream 68060 50801276 ~ 50801629 (+)
LOC110491026 LOC106560691 other upstream 632431 50098387 ~ 50100624 (+)
G152167 NA other upstream 2175219 48556782 ~ 48557686 (+)
G150997 NA other upstream 3185326 47497948 ~ 47547579 (+)
uevld uevld other upstream 3747679 46981686 ~ 47007672 (+)
G148191 NA other upstream 5240526 45472082 ~ 45492379 (+)
G154859 NA other downstream 432199 51165415 ~ 51167174 (+)
LOC110501653 LOC106560673 other downstream 588580 51317121 ~ 51339537 (+)
rl28 rl28 other downstream 679050 51412121 ~ 51417154 (+)
G155541 NA other downstream 687631 51420847 ~ 51421122 (+)
G156000 LOC106560791 other downstream 1083294 51816510 ~ 51824182 (+)

Expression


Co-expression Network