G154684


Basic Information

Item Value
gene id G154684
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 50801276 ~ 50801629 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU176942
CCTTCTATCTGTACCCTTATCTTCTCCTCTACTGTCAAATCCTCTCCCTGTTCCCCTTCTATCTGTACCCTTATCTTCTCCTCTACTGTCaaatcctctcctgtcttctcttctctttacTCTCTACCCCaccttctttcctctcctttttTGTCCCCTCTTCCCCCAGTGCTGTAGGCCTCATAAGGAGGAAAAACAACCCATTGTAGAGGTTATAGGTCTAGTAGAGCCTAGAGgggagcctccctccctccatcatctgCCTGCATGGTAAACAGGACATTTTCTCTCTCATGAATGAATGT

Function

NR:

description
PREDICTED: uncharacterized protein LOC107746508

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU176942 True 305 lncRNA 0.44 2 50801276 50801629

Neighbor

gene id symbol gene type direction distance location
LOC110491108 NA coding upstream 112129 50678814 ~ 50689147 (+)
zgc:56585 pgdh coding upstream 221060 50575416 ~ 50580216 (+)
LOC110515922 faxdc2 coding upstream 331151 50460347 ~ 50470125 (+)
LOC110510939 faxdc2 coding upstream 367720 50424133 ~ 50433556 (+)
LOC110491046 LOC106560687 coding upstream 565050 50223738 ~ 50236226 (+)
LOC110491193 LOC106560681 coding downstream 158502 50960131 ~ 50972173 (+)
sat2b sat2 coding downstream 181329 50982958 ~ 51008552 (+)
LOC110491259 LOC106560678 coding downstream 265862 51067491 ~ 51087131 (+)
LOC118944166 NA coding downstream 293094 51094723 ~ 51094847 (+)
LOC110491269 LOC106560677 coding downstream 312578 51114207 ~ 51136900 (+)
G154679 NA non-coding upstream 14323 50786357 ~ 50786953 (+)
G154663 NA non-coding upstream 17706 50733489 ~ 50783570 (+)
G154669 NA non-coding upstream 22998 50756971 ~ 50778278 (+)
G154664 NA non-coding upstream 65595 50733623 ~ 50735681 (+)
G154662 NA non-coding upstream 68060 50732905 ~ 50733216 (+)
LOC110491126 LOC106602822 non-coding downstream 6140 50717580 ~ 50884089 (+)
G154655 NA non-coding downstream 36168 50837797 ~ 50838560 (+)
G154702 NA non-coding downstream 43097 50844726 ~ 50853090 (+)
G154715 NA non-coding downstream 72457 50874086 ~ 50874616 (+)
G154740 NA non-coding downstream 175944 50977573 ~ 50979292 (+)
LOC110491026 LOC106560691 other upstream 700802 50098387 ~ 50100624 (+)
G152167 NA other upstream 2243590 48556782 ~ 48557686 (+)
G150997 NA other upstream 3253697 47497948 ~ 47547579 (+)
uevld uevld other upstream 3816050 46981686 ~ 47007672 (+)
G148191 NA other upstream 5308897 45472082 ~ 45492379 (+)
G154859 NA other downstream 363786 51165415 ~ 51167174 (+)
LOC110501653 LOC106560673 other downstream 520167 51317121 ~ 51339537 (+)
rl28 rl28 other downstream 610637 51412121 ~ 51417154 (+)
G155541 NA other downstream 619218 51420847 ~ 51421122 (+)
G156000 LOC106560791 other downstream 1014881 51816510 ~ 51824182 (+)

Expression


Co-expression Network