G154776


Basic Information

Item Value
gene id G154776
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 50984134 ~ 50984935 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU177070
ACTGTAGAGACCCTTTATTTATACAAGTGAATATCGACTATCacttcagcatgcttttgtggcacagtcgatgCCACGCAGGGCTACAGGCCAGAAGGTTGAGAGTTCGCTGACCACCACAGACAAGACGCTGCCTGCCTGTTTTATTACACTACAATCAGAGCCAGCTGCAGAGAGCAAGGGGGCACCTGGACGGTACATTGGCTGTTGGTGAGAAGGGCCTGGGGGTTGGGAAATGGGCCGGAGAGGTGATGAACCAGGCCAGGGAGATGATAACTCAAGGGCCGATGAACCATCTGTAGATTGGCCCTCAGGGCTCTGCTCCATCTCTGGACTGTCCAAAACACCATCCCCTTCCAACACCTACAATCTTCGCAAGGAATGATACGTTGAGTTTCAATTTCCAGGTAGAATAAAACGGCGTTGAACAACGAAGCATATTATAAGGAGCCACTCGTTT

Function

NR:

description
PREDICTED: transmembrane protein 229B-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU177070 True 460 lncRNA 0.42 2 50984134 50984935

Neighbor

gene id symbol gene type direction distance location
LOC110491193 LOC106560681 coding upstream 11961 50960131 ~ 50972173 (+)
LOC110491126 LOC106602822 coding upstream 100045 50717580 ~ 50884089 (+)
LOC110491108 NA coding upstream 294987 50678814 ~ 50689147 (+)
zgc:56585 pgdh coding upstream 403918 50575416 ~ 50580216 (+)
LOC110515922 faxdc2 coding upstream 514009 50460347 ~ 50470125 (+)
LOC110491259 LOC106560678 coding downstream 82556 51067491 ~ 51087131 (+)
LOC118944166 NA coding downstream 109788 51094723 ~ 51094847 (+)
LOC110491269 LOC106560677 coding downstream 129272 51114207 ~ 51136900 (+)
LOC110491287 LOC106602850 coding downstream 248770 51233705 ~ 51236559 (+)
LOC110491302 LOC106560674 coding downstream 262806 51247741 ~ 51294746 (+)
G154740 NA non-coding upstream 4842 50977573 ~ 50979292 (+)
G154715 NA non-coding upstream 109518 50874086 ~ 50874616 (+)
G154702 NA non-coding upstream 131044 50844726 ~ 50853090 (+)
G154655 NA non-coding upstream 145574 50837797 ~ 50838560 (+)
G154796 NA non-coding downstream 33705 51018640 ~ 51018990 (+)
G154775 NA non-coding downstream 54937 51039872 ~ 51042833 (+)
G154789 NA non-coding downstream 60707 51045642 ~ 51062055 (+)
G154823 NA non-coding downstream 104832 51089767 ~ 51090123 (+)
G154825 NA non-coding downstream 105554 51090489 ~ 51090717 (+)
LOC110491026 LOC106560691 other upstream 883660 50098387 ~ 50100624 (+)
G152167 NA other upstream 2426448 48556782 ~ 48557686 (+)
G150997 NA other upstream 3436555 47497948 ~ 47547579 (+)
uevld uevld other upstream 3998908 46981686 ~ 47007672 (+)
G148191 NA other upstream 5491755 45472082 ~ 45492379 (+)
G154859 NA other downstream 180480 51165415 ~ 51167174 (+)
LOC110501653 LOC106560673 other downstream 336861 51317121 ~ 51339537 (+)
rl28 rl28 other downstream 427331 51412121 ~ 51417154 (+)
G155541 NA other downstream 435912 51420847 ~ 51421122 (+)
G156000 LOC106560791 other downstream 831575 51816510 ~ 51824182 (+)

Expression


Co-expression Network