G154823


Basic Information

Item Value
gene id G154823
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 51089767 ~ 51090123 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU177117
tcaatttggtttaaataatgcaaaaacaaagtgttggagaagaaagtaaaagtgcaatatgtgccatgtaaaaaagctaacgtttaagttccttgctcagaacatgagaacatatgaaagctggtggttccttttaacatgagacttcaatattccaaggtaagaggttttaggttgtagttaatatagtatttataggactctttctctctataccatttgtatttcatatacctttgactattggaggttcttataggcactttagtattgccagtgtaacagtatagcttccgtccctctcctcgcccctacctgggctcgaaccaggaacacatcaacaacagccaccctcga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU177117 True 357 lncRNA 0.38 1 51089767 51090123

Neighbor

gene id symbol gene type direction distance location
LOC110491259 LOC106560678 coding upstream 2636 51067491 ~ 51087131 (+)
sat2b sat2 coding upstream 81215 50982958 ~ 51008552 (+)
LOC110491193 LOC106560681 coding upstream 117594 50960131 ~ 50972173 (+)
LOC110491126 LOC106602822 coding upstream 205678 50717580 ~ 50884089 (+)
LOC110491108 NA coding upstream 400620 50678814 ~ 50689147 (+)
LOC118944166 NA coding downstream 4600 51094723 ~ 51094847 (+)
LOC110491269 LOC106560677 coding downstream 24084 51114207 ~ 51136900 (+)
LOC110491287 LOC106602850 coding downstream 143582 51233705 ~ 51236559 (+)
LOC110491302 LOC106560674 coding downstream 157618 51247741 ~ 51294746 (+)
LOC110501653 LOC106560673 coding downstream 226998 51317121 ~ 51339537 (+)
G154789 NA non-coding upstream 27712 51045642 ~ 51062055 (+)
G154775 NA non-coding upstream 46934 51039872 ~ 51042833 (+)
G154796 NA non-coding upstream 70777 51018640 ~ 51018990 (+)
G154776 NA non-coding upstream 104832 50984134 ~ 50984935 (+)
G154740 NA non-coding upstream 110475 50977573 ~ 50979292 (+)
G154825 NA non-coding downstream 366 51090489 ~ 51090717 (+)
G154829 NA non-coding downstream 8098 51098221 ~ 51098441 (+)
G154836 NA non-coding downstream 18677 51108800 ~ 51109074 (+)
G154837 NA non-coding downstream 21412 51111535 ~ 51111775 (+)
G154817 NA non-coding downstream 55413 51145536 ~ 51147897 (+)
LOC110491026 LOC106560691 other upstream 989293 50098387 ~ 50100624 (+)
G152167 NA other upstream 2532081 48556782 ~ 48557686 (+)
G150997 NA other upstream 3542188 47497948 ~ 47547579 (+)
uevld uevld other upstream 4104541 46981686 ~ 47007672 (+)
G148191 NA other upstream 5597388 45472082 ~ 45492379 (+)
G154859 NA other downstream 75292 51165415 ~ 51167174 (+)
rl28 rl28 other downstream 322143 51412121 ~ 51417154 (+)
G155541 NA other downstream 330724 51420847 ~ 51421122 (+)
G156000 LOC106560791 other downstream 726387 51816510 ~ 51824182 (+)

Expression


Co-expression Network