G154829


Basic Information

Item Value
gene id G154829
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 51098221 ~ 51098441 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU177123
AGTCCCGACTTTGAATCTTCGTCATACTTCTGACTTTTTAGGTAGGACTTGCGAAGCAAAACTCCCAACTTTAAATCTTCGACTTTTTAGGTGGGAACCgctcattattacgcacacctgtcaccatcgttacgcgcaccagcgcctcatcagactcacttggactccattacctccctgattaccttccctatatttgTAACTCCCATTGGTTCTTTCTC

Function

NR:

description
uncharacterized protein LOC109867584 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU177123 True 221 lncRNA 0.35 1 51098221 51098441

Neighbor

gene id symbol gene type direction distance location
LOC118944166 NA coding upstream 3374 51094723 ~ 51094847 (+)
LOC110491259 LOC106560678 coding upstream 11090 51067491 ~ 51087131 (+)
sat2b sat2 coding upstream 89669 50982958 ~ 51008552 (+)
LOC110491193 LOC106560681 coding upstream 126048 50960131 ~ 50972173 (+)
LOC110491126 LOC106602822 coding upstream 214132 50717580 ~ 50884089 (+)
LOC110491269 LOC106560677 coding downstream 15766 51114207 ~ 51136900 (+)
LOC110491287 LOC106602850 coding downstream 135264 51233705 ~ 51236559 (+)
LOC110491302 LOC106560674 coding downstream 149300 51247741 ~ 51294746 (+)
LOC110501653 LOC106560673 coding downstream 218680 51317121 ~ 51339537 (+)
LOC110491314 LOC106560671 coding downstream 276883 51375324 ~ 51405615 (+)
G154825 NA non-coding upstream 7504 51090489 ~ 51090717 (+)
G154823 NA non-coding upstream 8098 51089767 ~ 51090123 (+)
G154789 NA non-coding upstream 36166 51045642 ~ 51062055 (+)
G154775 NA non-coding upstream 55388 51039872 ~ 51042833 (+)
G154796 NA non-coding upstream 79231 51018640 ~ 51018990 (+)
G154836 NA non-coding downstream 10359 51108800 ~ 51109074 (+)
G154837 NA non-coding downstream 13094 51111535 ~ 51111775 (+)
G154817 NA non-coding downstream 47095 51145536 ~ 51147897 (+)
G154901 NA non-coding downstream 196361 51294802 ~ 51299854 (+)
G155515 NA non-coding downstream 252185 51350626 ~ 51355466 (+)
LOC110491026 LOC106560691 other upstream 997747 50098387 ~ 50100624 (+)
G152167 NA other upstream 2540535 48556782 ~ 48557686 (+)
G150997 NA other upstream 3550642 47497948 ~ 47547579 (+)
uevld uevld other upstream 4112995 46981686 ~ 47007672 (+)
G148191 NA other upstream 5605842 45472082 ~ 45492379 (+)
G154859 NA other downstream 66974 51165415 ~ 51167174 (+)
rl28 rl28 other downstream 313825 51412121 ~ 51417154 (+)
G155541 NA other downstream 322406 51420847 ~ 51421122 (+)
G156000 LOC106560791 other downstream 718069 51816510 ~ 51824182 (+)

Expression


Co-expression Network