G155608


Basic Information

Item Value
gene id G155608
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 51375363 ~ 51403670 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU177973
ATATTTACAGATATTTTTATGTTGCAAACAATCACATACAGATATATTGGAACACAAGTTTACTGTGCTTATGTgcatctgtgtgagtgtgtgacaaATAGAGCAGTAAGAGTACAGAAAGCAGAAGGAAATCCCTTGGTGAGGGAGACCTCAAGAGGGTTAACAAGGCAGAGACAGCAGAGAATGAGTGGGCATGGGGTGCTCTTGGGACACATGACAGCAGaagtttgtgtatgtatgtggtgtgtgtgtgtaacacatcTGCTCATCTATGCATCTTCCTTGAAGTGTGTGTATGACGGAGCGAGATAAAGTCTTCATTTGTGTGTGTTCTTTACAGCATAGGGATCTTTAATATCCTTGTGAGTATCTACTAGAAGCCAGTCAGTTACCAGTAAGTGAGAGGGAGTATAAACAGAGGGACAGAAAGCCttgcctccacacacacaacctctattctctaccgcCATACACAGACTACACAAAGTACGCACAGACACTACCAGTCATCTCTTATTCTACTCCTCCGTCACAATTCTCTTCCTttcacactcttctctctctcctaggtAGCGTCAGAATAAGTAGCAGGAAGAAACAAAATAAAACCCAAACCAAACCCTTAAAGAACAGACGTGATTGGTTTATGTGCACAGTCACAATTACCCAGCATCCACTGGGCAAGGACACAGGAACCATTTACCCTTTGACCCCCACGTCATGGCAAATTTACAGTATGCACGTTTTTTGGGGAAATCACCAGCCAAGGAATACTGATTTTTTCTTTtagtgtgtgtgtgtgtgtgtgtgtgtactcacagttCATCTCGTTGTCTCTGTGACAGCACCATGGTGGCTGTAGTGGCTGCTCTCGCCCTCTGGACTAGGGGTGAGGGTGTAGGGGGGGTCCTCAGGTCAGCTGCTCAGTCCTCAGAGACTACAACTGGTACTCCAAACCTTCTATGAATGATCTGTCTCATAGTCCTTGTTCTGCGATAATAAAAAAGCCgatcaaatgttttgtttttgctcAGACCCTGCTGGGTGACATCTTGTTTTCTGCTGCTGTATTTCAGTCAGGCGTCACTACCGCCTCCGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU177973 True 1099 lncRNA 0.45 3 51375363 51403670

Neighbor

gene id symbol gene type direction distance location
LOC110491276 LOC106560676 coding downstream 146034 51180770 ~ 51229329 (-)
LOC110491241 LOC106560679 coding downstream 325166 51039870 ~ 51050197 (-)
LOC110491226 NA coding downstream 390378 50984132 ~ 50984985 (-)
LOC110491182 LOC106602821 coding downstream 421088 50906636 ~ 50954275 (-)
rbm41 rbm41 coding downstream 696550 50665296 ~ 50678813 (-)
lingo1a LOC106560791 coding upstream 418621 51822291 ~ 52089547 (-)
LOC118937283 NA coding upstream 1375926 52779596 ~ 52780459 (-)
snx33 snx33 coding upstream 1669623 53032902 ~ 53112547 (-)
LOC118940482 NA coding upstream 1778928 53182598 ~ 53188868 (-)
crabp1a crabp1 coding upstream 1908351 53312021 ~ 53343562 (-)
G155479 NA non-coding downstream 65710 51309334 ~ 51309653 (-)
G155360 NA non-coding downstream 238888 51132059 ~ 51136475 (-)
G155382 NA non-coding downstream 264324 51110749 ~ 51111039 (-)
G155370 NA non-coding downstream 280903 51094105 ~ 51094460 (-)
G155366 NA non-coding downstream 283441 51091720 ~ 51091922 (-)
G155665 NA non-coding upstream 5729 51409399 ~ 51409602 (-)
G155666 LOC100194703 non-coding upstream 5951 51409621 ~ 51410116 (-)
G155667 NA non-coding upstream 6676 51410346 ~ 51410597 (-)
G155668 NA non-coding upstream 6970 51410640 ~ 51410885 (-)
G155610 NA non-coding upstream 9991 51412269 ~ 51417110 (-)
G155281 LOC106560681 other downstream 403428 50971076 ~ 50971935 (-)
G155072 NA other downstream 794014 50579798 ~ 50581349 (-)
G155003 NA other downstream 923216 50415743 ~ 50452147 (-)
G154338 NA other downstream 1217538 50156686 ~ 50157825 (-)
G159120 NA other upstream 2453016 53856686 ~ 53857552 (-)
cd59 cd59-2 other upstream 2565773 53969443 ~ 53971367 (-)
ambra1b LOC106560763 other upstream 2853756 54213602 ~ 54268394 (-)

Expression


Co-expression Network