Gene
RNA
| Item | Value |
|---|---|
| gene id | G155610 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 51412269 ~ 51417110 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| 60S ribosomal protein L28-like isoform X1 |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU177982 | False | 376 | TUCP | 0.49 | 4 | 51412269 | 51417110 |
| TU177977 | True | 477 | lncRNA | 0.43 | 2 | 51413661 | 51414376 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110491276 | LOC106560676 | coding | downstream | 184332 | 51180770 ~ 51229329 (-) |
| LOC110491241 | LOC106560679 | coding | downstream | 363464 | 51039870 ~ 51050197 (-) |
| LOC110491226 | NA | coding | downstream | 428676 | 50984132 ~ 50984985 (-) |
| LOC110491182 | LOC106602821 | coding | downstream | 459386 | 50906636 ~ 50954275 (-) |
| rbm41 | rbm41 | coding | downstream | 734848 | 50665296 ~ 50678813 (-) |
| lingo1a | LOC106560791 | coding | upstream | 407915 | 51822291 ~ 52089547 (-) |
| LOC118937283 | NA | coding | upstream | 1365220 | 52779596 ~ 52780459 (-) |
| snx33 | snx33 | coding | upstream | 1658917 | 53032902 ~ 53112547 (-) |
| LOC118940482 | NA | coding | upstream | 1768222 | 53182598 ~ 53188868 (-) |
| crabp1a | crabp1 | coding | upstream | 1897645 | 53312021 ~ 53343562 (-) |
| G155668 | NA | non-coding | downstream | 2776 | 51410640 ~ 51410885 (-) |
| G155667 | NA | non-coding | downstream | 3064 | 51410346 ~ 51410597 (-) |
| G155666 | LOC100194703 | non-coding | downstream | 3545 | 51409621 ~ 51410116 (-) |
| G155665 | NA | non-coding | downstream | 4059 | 51409399 ~ 51409602 (-) |
| G155608 | NA | non-coding | downstream | 9991 | 51375363 ~ 51403670 (-) |
| G155673 | NA | non-coding | upstream | 10175 | 51424551 ~ 51425133 (-) |
| G155702 | NA | non-coding | upstream | 43922 | 51458298 ~ 51502123 (-) |
| G155847 | NA | non-coding | upstream | 179985 | 51594361 ~ 51594760 (-) |
| G156400 | NA | non-coding | upstream | 402279 | 51816655 ~ 51820176 (-) |
| G156452 | NA | non-coding | upstream | 482498 | 51896874 ~ 51897074 (-) |
| G155281 | LOC106560681 | other | downstream | 441726 | 50971076 ~ 50971935 (-) |
| G155072 | NA | other | downstream | 832312 | 50579798 ~ 50581349 (-) |
| G155003 | NA | other | downstream | 961514 | 50415743 ~ 50452147 (-) |
| G154338 | NA | other | downstream | 1255836 | 50156686 ~ 50157825 (-) |
| G159120 | NA | other | upstream | 2442310 | 53856686 ~ 53857552 (-) |
| cd59 | cd59-2 | other | upstream | 2555067 | 53969443 ~ 53971367 (-) |
| ambra1b | LOC106560763 | other | upstream | 2843050 | 54213602 ~ 54268394 (-) |
| G159890 | LOC106562215 | other | upstream | 3313923 | 54728299 ~ 54728860 (-) |
