G155845


Basic Information

Item Value
gene id G155845
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 51592842 ~ 51593164 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU178228
GTGgtatgtttggattcagtcttgtgtctgatgaactgttgtgtcctcacctttagTCTTATTTTCCAATAATCTCAaaacaaggatatgcatattcttggtaccattttaaatgaaacactttgaagtttatggaaatgtgaaaggaatgtagtagaatataacaatagatctggtagaagataatacaaaggaaaaaaacaaccattccttaaaaaaaaaattgtaccatcatctttgaaatgcaagagaaaggccataatgtattattcctacccaggtgcaatttagattttggccactagatggcatcagtgtatgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU178228 True 323 lncRNA 0.33 1 51592842 51593164

Neighbor

gene id symbol gene type direction distance location
LOC118944140 NA coding upstream 163270 51429454 ~ 51429572 (+)
LOC118944142 NA coding upstream 170389 51422337 ~ 51422453 (+)
LOC118944199 NA coding upstream 170813 51421856 ~ 51422029 (+)
rl28 rl28 coding upstream 175688 51412121 ~ 51417154 (+)
LOC110491314 LOC106560671 coding upstream 187227 51375324 ~ 51405615 (+)
cspg4 cspg4 coding downstream 1310027 52903191 ~ 53018812 (+)
snupn snupn coding downstream 1540333 53133497 ~ 53167781 (+)
ptpn9a ptpn9 coding downstream 1611917 53205081 ~ 53249227 (+)
sin3aa sin3a coding downstream 1659644 53252808 ~ 53285424 (+)
wdr61 wdr61 coding downstream 1757936 53351100 ~ 53370380 (+)
G155492 NA non-coding upstream 90845 51430866 ~ 51501997 (+)
G155491 NA non-coding upstream 181979 51410337 ~ 51410863 (+)
G155489 NA non-coding upstream 192628 51387977 ~ 51400214 (+)
G155515 NA non-coding upstream 237376 51350626 ~ 51355466 (+)
G154901 NA non-coding upstream 292988 51294802 ~ 51299854 (+)
G155940 LOC106613263 non-coding downstream 134357 51727521 ~ 51835110 (+)
G156000 LOC106560791 non-coding downstream 223346 51816510 ~ 51824182 (+)
G156027 NA non-coding downstream 272308 51865472 ~ 51889131 (+)
G156038 NA non-coding downstream 290321 51883485 ~ 51896834 (+)
G156050 NA non-coding downstream 313007 51906171 ~ 51906450 (+)
G155541 NA other upstream 171720 51420847 ~ 51421122 (+)
LOC110501653 LOC106560673 other upstream 270409 51317121 ~ 51339537 (+)
G154859 NA other upstream 425668 51165415 ~ 51167174 (+)
LOC110491026 LOC106560691 other upstream 1492368 50098387 ~ 50100624 (+)
G158778 LOC106560766 other downstream 2428444 54021608 ~ 54021904 (+)
G159415 NA other downstream 2759819 54352983 ~ 54353388 (+)
G159889 LOC106562215 other downstream 3135132 54728296 ~ 54728860 (+)
G160569 NA other downstream 4352979 55946143 ~ 55947245 (+)

Expression


Co-expression Network