G156027


Basic Information

Item Value
gene id G156027
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 51865472 ~ 51889131 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU178428
tttaagggacctctgagactatcacagtgcaggtgcattgatacggagacttgattacacacaggtggattgtatttatcagcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaaaggggctgaataatttagcacgaccaatttttcagtttttgatttgttaaaaaagtttgaaatatccaataaatgtcgttccacttcatgattgtgtcccacttgttgttgattcttcacaaaaaaatacagttttatatatttatttttgaagcctgaaatgtggcaaaaggtcgcaaagttcaagggggccgaatactttcgcaaggcactgtacatataat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU178428 True 386 lncRNA 0.34 2 51865472 51889131

Neighbor

gene id symbol gene type direction distance location
LOC118944140 NA coding upstream 435900 51429454 ~ 51429572 (+)
LOC118944142 NA coding upstream 443019 51422337 ~ 51422453 (+)
LOC118944199 NA coding upstream 443443 51421856 ~ 51422029 (+)
rl28 rl28 coding upstream 448318 51412121 ~ 51417154 (+)
LOC110491314 LOC106560671 coding upstream 459857 51375324 ~ 51405615 (+)
cspg4 cspg4 coding downstream 1014060 52903191 ~ 53018812 (+)
snupn snupn coding downstream 1244366 53133497 ~ 53167781 (+)
ptpn9a ptpn9 coding downstream 1315950 53205081 ~ 53249227 (+)
sin3aa sin3a coding downstream 1363677 53252808 ~ 53285424 (+)
wdr61 wdr61 coding downstream 1461969 53351100 ~ 53370380 (+)
G155940 LOC106613263 non-coding upstream 30362 51727521 ~ 51835110 (+)
G156000 LOC106560791 non-coding upstream 45226 51816510 ~ 51824182 (+)
G155845 NA non-coding upstream 272308 51592842 ~ 51593164 (+)
G155492 NA non-coding upstream 363475 51430866 ~ 51501997 (+)
G155491 NA non-coding upstream 454609 51410337 ~ 51410863 (+)
G156050 NA non-coding downstream 17040 51906171 ~ 51906450 (+)
G156060 NA non-coding downstream 30249 51919380 ~ 51919580 (+)
G156062 NA non-coding downstream 32240 51921371 ~ 51921572 (+)
G156066 NA non-coding downstream 36345 51925476 ~ 51925682 (+)
G156669 NA non-coding downstream 276691 52165822 ~ 52166104 (+)
G155541 NA other upstream 444350 51420847 ~ 51421122 (+)
LOC110501653 LOC106560673 other upstream 543039 51317121 ~ 51339537 (+)
G154859 NA other upstream 698298 51165415 ~ 51167174 (+)
G158778 LOC106560766 other downstream 2132477 54021608 ~ 54021904 (+)
G159415 NA other downstream 2463852 54352983 ~ 54353388 (+)
G159889 LOC106562215 other downstream 2839165 54728296 ~ 54728860 (+)
G160569 NA other downstream 4057012 55946143 ~ 55947245 (+)
G161687 NA other downstream 4355913 56245044 ~ 56252598 (+)

Expression


Co-expression Network