G156038


Basic Information

Item Value
gene id G156038
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 51883485 ~ 51896834 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU178441
ccatccgccacctcatcaggagcatgcccaggcgttgtagggaggtcatacaggcacgtggaggccacacacactactgagcctcattttgacttgttttaaggacataacatcaaagttggatcagcctgtagtgtggttttccactttaattttgagtgtgactccaaatccagacctccatgggttgataaattaaatttccattgataatttttgtgtgattttgttatcagcacattcaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU178441 True 246 lncRNA 0.43 2 51883485 51896834

Neighbor

gene id symbol gene type direction distance location
LOC118944140 NA coding upstream 453913 51429454 ~ 51429572 (+)
LOC118944142 NA coding upstream 461032 51422337 ~ 51422453 (+)
LOC118944199 NA coding upstream 461456 51421856 ~ 51422029 (+)
rl28 rl28 coding upstream 466331 51412121 ~ 51417154 (+)
LOC110491314 LOC106560671 coding upstream 477870 51375324 ~ 51405615 (+)
cspg4 cspg4 coding downstream 1006357 52903191 ~ 53018812 (+)
snupn snupn coding downstream 1236663 53133497 ~ 53167781 (+)
ptpn9a ptpn9 coding downstream 1308247 53205081 ~ 53249227 (+)
sin3aa sin3a coding downstream 1355974 53252808 ~ 53285424 (+)
wdr61 wdr61 coding downstream 1454266 53351100 ~ 53370380 (+)
G155940 LOC106613263 non-coding upstream 48375 51727521 ~ 51835110 (+)
G156000 LOC106560791 non-coding upstream 63239 51816510 ~ 51824182 (+)
G155845 NA non-coding upstream 290321 51592842 ~ 51593164 (+)
G155492 NA non-coding upstream 381488 51430866 ~ 51501997 (+)
G155491 NA non-coding upstream 472622 51410337 ~ 51410863 (+)
G156050 NA non-coding downstream 9337 51906171 ~ 51906450 (+)
G156060 NA non-coding downstream 22546 51919380 ~ 51919580 (+)
G156062 NA non-coding downstream 24537 51921371 ~ 51921572 (+)
G156066 NA non-coding downstream 28642 51925476 ~ 51925682 (+)
G156669 NA non-coding downstream 268988 52165822 ~ 52166104 (+)
G155541 NA other upstream 462363 51420847 ~ 51421122 (+)
LOC110501653 LOC106560673 other upstream 561052 51317121 ~ 51339537 (+)
G154859 NA other upstream 716311 51165415 ~ 51167174 (+)
G158778 LOC106560766 other downstream 2124774 54021608 ~ 54021904 (+)
G159415 NA other downstream 2456149 54352983 ~ 54353388 (+)
G159889 LOC106562215 other downstream 2831462 54728296 ~ 54728860 (+)
G160569 NA other downstream 4049309 55946143 ~ 55947245 (+)
G161687 NA other downstream 4348210 56245044 ~ 56252598 (+)

Expression


Co-expression Network