G156050


Basic Information

Item Value
gene id G156050
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 51906171 ~ 51906450 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU178453
ctacaagtccctacaccatggtaACCCTGCCTCCCTACAAGCTATGGGTATTGATCATATTCCGGCCTGTATTAGAAAAGGGGACCGTCTTAAACAGTTAAACCAAAGGGAAAGTTTTTGGATTTACAAattacaggccactaaataccctggtttaagtCTCACCCTTCCTGTCGTGATGGATACATTTGCTCtcatctagtggacattttgctCAATTGCCCATAGCTATGGTTagactgttgttgttcatgttttgctgtgttctagtgtactatgg

Function

NR:

description
uncharacterized protein LOC111575603 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU178453 True 280 lncRNA 0.42 1 51906171 51906450

Neighbor

gene id symbol gene type direction distance location
LOC118944140 NA coding upstream 476599 51429454 ~ 51429572 (+)
LOC118944142 NA coding upstream 483718 51422337 ~ 51422453 (+)
LOC118944199 NA coding upstream 484142 51421856 ~ 51422029 (+)
rl28 rl28 coding upstream 489017 51412121 ~ 51417154 (+)
LOC110491314 LOC106560671 coding upstream 500556 51375324 ~ 51405615 (+)
cspg4 cspg4 coding downstream 996741 52903191 ~ 53018812 (+)
snupn snupn coding downstream 1227047 53133497 ~ 53167781 (+)
ptpn9a ptpn9 coding downstream 1298631 53205081 ~ 53249227 (+)
sin3aa sin3a coding downstream 1346358 53252808 ~ 53285424 (+)
wdr61 wdr61 coding downstream 1444650 53351100 ~ 53370380 (+)
G156038 NA non-coding upstream 9337 51883485 ~ 51896834 (+)
G156027 NA non-coding upstream 17040 51865472 ~ 51889131 (+)
G155940 LOC106613263 non-coding upstream 71061 51727521 ~ 51835110 (+)
G156000 LOC106560791 non-coding upstream 85925 51816510 ~ 51824182 (+)
G155845 NA non-coding upstream 313007 51592842 ~ 51593164 (+)
G156060 NA non-coding downstream 12930 51919380 ~ 51919580 (+)
G156062 NA non-coding downstream 14921 51921371 ~ 51921572 (+)
G156066 NA non-coding downstream 19026 51925476 ~ 51925682 (+)
G156669 NA non-coding downstream 259372 52165822 ~ 52166104 (+)
G156756 NA non-coding downstream 317066 52223516 ~ 52227861 (+)
G155541 NA other upstream 485049 51420847 ~ 51421122 (+)
LOC110501653 LOC106560673 other upstream 583738 51317121 ~ 51339537 (+)
G154859 NA other upstream 738997 51165415 ~ 51167174 (+)
G158778 LOC106560766 other downstream 2115158 54021608 ~ 54021904 (+)
G159415 NA other downstream 2446533 54352983 ~ 54353388 (+)
G159889 LOC106562215 other downstream 2821846 54728296 ~ 54728860 (+)
G160569 NA other downstream 4039693 55946143 ~ 55947245 (+)
G161687 NA other downstream 4338594 56245044 ~ 56252598 (+)

Expression


Co-expression Network