G156812


Basic Information

Item Value
gene id G156812
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 52258771 ~ 52259069 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU179235
CTATCAATACAATGCCCAGGATTATTTTCTAGATGTGCATCACTCTTTGTTACGTTGAGTGCTCATTGTGTCTTGCAGGGTAAAACTATACCTTATTAAATCCAACCATTGGAAAAAGGAGTTATTGTGACATGTCTTTTTGACTTTGCATCTTTCTGATCAGCAATCATTCTCAAACTATCAAGACATTAAGTTGATTATCTTTATCCCAGCAAGATAATGGGTCTAGGAATGTTCCATGCTGGAGCTAaatgttttttggttactacagttttgatgtcttcactattattctacaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU179235 True 299 lncRNA 0.52 1 52258771 52259069

Neighbor

gene id symbol gene type direction distance location
LOC118944140 NA coding upstream 829199 51429454 ~ 51429572 (+)
LOC118944142 NA coding upstream 836318 51422337 ~ 51422453 (+)
LOC118944199 NA coding upstream 836742 51421856 ~ 51422029 (+)
rl28 rl28 coding upstream 841617 51412121 ~ 51417154 (+)
LOC110491314 LOC106560671 coding upstream 853156 51375324 ~ 51405615 (+)
cspg4 cspg4 coding downstream 644122 52903191 ~ 53018812 (+)
snupn snupn coding downstream 874428 53133497 ~ 53167781 (+)
ptpn9a ptpn9 coding downstream 946012 53205081 ~ 53249227 (+)
sin3aa sin3a coding downstream 993739 53252808 ~ 53285424 (+)
wdr61 wdr61 coding downstream 1092031 53351100 ~ 53370380 (+)
G156769 NA non-coding upstream 27116 52231452 ~ 52231655 (+)
G156756 NA non-coding upstream 30910 52223516 ~ 52227861 (+)
G156669 NA non-coding upstream 92667 52165822 ~ 52166104 (+)
G156066 NA non-coding upstream 333089 51925476 ~ 51925682 (+)
G156062 NA non-coding upstream 337199 51921371 ~ 51921572 (+)
G156828 NA non-coding downstream 10726 52269795 ~ 52270065 (+)
G156829 NA non-coding downstream 11238 52270307 ~ 52270718 (+)
G156858 NA non-coding downstream 30931 52290000 ~ 52290202 (+)
G156864 NA non-coding downstream 35703 52294772 ~ 52294981 (+)
G156900 NA non-coding downstream 80914 52339983 ~ 52380989 (+)
G156000 LOC106560791 other upstream 434589 51816510 ~ 51824182 (+)
G155541 NA other upstream 837649 51420847 ~ 51421122 (+)
LOC110501653 LOC106560673 other upstream 936338 51317121 ~ 51339537 (+)
G154859 NA other upstream 1091597 51165415 ~ 51167174 (+)
G158778 LOC106560766 other downstream 1762539 54021608 ~ 54021904 (+)
G159415 NA other downstream 2093914 54352983 ~ 54353388 (+)
G159889 LOC106562215 other downstream 2469227 54728296 ~ 54728860 (+)
G160569 NA other downstream 3687074 55946143 ~ 55947245 (+)
G161687 NA other downstream 3985975 56245044 ~ 56252598 (+)

Expression


Co-expression Network