G156828


Basic Information

Item Value
gene id G156828
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 52269795 ~ 52270065 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU179251
attttgtagtgatgtTGTGCAGGTTGGAAGCgatgtttttctggatcaaatgcgccaaataaaatggacattttggatatatatcgacggaattaataaaaaaaaggaccatttgtgatgtttatgggacatattggagtgccaacaaaagaagcttgtcaaaggtaaggcatgaattatatttgtatttctgcgttttgtgtcgcgcttgcagggttgaaatatggtttctctctttgtttatggAGGTACTATCCTCAGAttatagcat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU179251 True 271 lncRNA 0.36 1 52269795 52270065

Neighbor

gene id symbol gene type direction distance location
LOC118944140 NA coding upstream 840223 51429454 ~ 51429572 (+)
LOC118944142 NA coding upstream 847342 51422337 ~ 51422453 (+)
LOC118944199 NA coding upstream 847766 51421856 ~ 51422029 (+)
rl28 rl28 coding upstream 852641 51412121 ~ 51417154 (+)
LOC110491314 LOC106560671 coding upstream 864180 51375324 ~ 51405615 (+)
cspg4 cspg4 coding downstream 633126 52903191 ~ 53018812 (+)
snupn snupn coding downstream 863432 53133497 ~ 53167781 (+)
ptpn9a ptpn9 coding downstream 935016 53205081 ~ 53249227 (+)
sin3aa sin3a coding downstream 982743 53252808 ~ 53285424 (+)
wdr61 wdr61 coding downstream 1081035 53351100 ~ 53370380 (+)
G156812 NA non-coding upstream 10726 52258771 ~ 52259069 (+)
G156769 NA non-coding upstream 38140 52231452 ~ 52231655 (+)
G156756 NA non-coding upstream 41934 52223516 ~ 52227861 (+)
G156669 NA non-coding upstream 103691 52165822 ~ 52166104 (+)
G156066 NA non-coding upstream 344113 51925476 ~ 51925682 (+)
G156829 NA non-coding downstream 242 52270307 ~ 52270718 (+)
G156858 NA non-coding downstream 19935 52290000 ~ 52290202 (+)
G156864 NA non-coding downstream 24707 52294772 ~ 52294981 (+)
G156900 NA non-coding downstream 69918 52339983 ~ 52380989 (+)
G157095 NA non-coding downstream 197501 52467566 ~ 52468071 (+)
G156000 LOC106560791 other upstream 445613 51816510 ~ 51824182 (+)
G155541 NA other upstream 848673 51420847 ~ 51421122 (+)
LOC110501653 LOC106560673 other upstream 947362 51317121 ~ 51339537 (+)
G154859 NA other upstream 1102621 51165415 ~ 51167174 (+)
G158778 LOC106560766 other downstream 1751543 54021608 ~ 54021904 (+)
G159415 NA other downstream 2082918 54352983 ~ 54353388 (+)
G159889 LOC106562215 other downstream 2458231 54728296 ~ 54728860 (+)
G160569 NA other downstream 3676078 55946143 ~ 55947245 (+)
G161687 NA other downstream 3974979 56245044 ~ 56252598 (+)

Expression


Co-expression Network