G156829


Basic Information

Item Value
gene id G156829
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 52270307 ~ 52270718 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU179252
GCGTGCATGATTttgctcatggcattctgccagacctcttagtcaaacagctcttattcggcccccttcactgtagaagcctgaaacaaggttataaagactgttgacatctagtggaagcattaggaagtgcaatcgTACCAAATTTACACTGTGTCTTGGATAGGCAAAGAATTGAAAACCTTCAAGCCTTAGATTTCTTCTCtgatttttgcctgccatatcagttattttatactcacagacatcattcaaacagtttcagaaacttcagagtgttttctatccaaatctactgataatatgcatatcttagcttctgggcctgagtagcaggcagtttactctgggcaccttattcatccaagctactcaatactgccccccatccATAAAACGATAAACTGCTGAT

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU179252 True 412 lncRNA 0.41 1 52270307 52270718

Neighbor

gene id symbol gene type direction distance location
LOC118944140 NA coding upstream 840735 51429454 ~ 51429572 (+)
LOC118944142 NA coding upstream 847854 51422337 ~ 51422453 (+)
LOC118944199 NA coding upstream 848278 51421856 ~ 51422029 (+)
rl28 rl28 coding upstream 853153 51412121 ~ 51417154 (+)
LOC110491314 LOC106560671 coding upstream 864692 51375324 ~ 51405615 (+)
cspg4 cspg4 coding downstream 632473 52903191 ~ 53018812 (+)
snupn snupn coding downstream 862779 53133497 ~ 53167781 (+)
ptpn9a ptpn9 coding downstream 934363 53205081 ~ 53249227 (+)
sin3aa sin3a coding downstream 982090 53252808 ~ 53285424 (+)
wdr61 wdr61 coding downstream 1080382 53351100 ~ 53370380 (+)
G156828 NA non-coding upstream 242 52269795 ~ 52270065 (+)
G156812 NA non-coding upstream 11238 52258771 ~ 52259069 (+)
G156769 NA non-coding upstream 38652 52231452 ~ 52231655 (+)
G156756 NA non-coding upstream 42446 52223516 ~ 52227861 (+)
G156669 NA non-coding upstream 104203 52165822 ~ 52166104 (+)
G156858 NA non-coding downstream 19282 52290000 ~ 52290202 (+)
G156864 NA non-coding downstream 24054 52294772 ~ 52294981 (+)
G156900 NA non-coding downstream 69265 52339983 ~ 52380989 (+)
G157095 NA non-coding downstream 196848 52467566 ~ 52468071 (+)
G157099 NA non-coding downstream 197442 52468160 ~ 52468366 (+)
G156000 LOC106560791 other upstream 446125 51816510 ~ 51824182 (+)
G155541 NA other upstream 849185 51420847 ~ 51421122 (+)
LOC110501653 LOC106560673 other upstream 947874 51317121 ~ 51339537 (+)
G154859 NA other upstream 1103133 51165415 ~ 51167174 (+)
G158778 LOC106560766 other downstream 1750890 54021608 ~ 54021904 (+)
G159415 NA other downstream 2082265 54352983 ~ 54353388 (+)
G159889 LOC106562215 other downstream 2457578 54728296 ~ 54728860 (+)
G160569 NA other downstream 3675425 55946143 ~ 55947245 (+)
G161687 NA other downstream 3974326 56245044 ~ 56252598 (+)

Expression


Co-expression Network