G156858


Basic Information

Item Value
gene id G156858
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 52290000 ~ 52290202 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU179281
GCTATTACAATAATTACTCACTGTTATCCAATGGACTGGATCTGTGAATTCTAAAGAGCTATAGCTCAACAACCGGCTTCCGTCATTTGCATGGATTAACAGAAACACAATGCAGGACAAACAAATGCACATGcactgcattgtgggaaatgtgtTTTCTATGAAGGACTCGATGGACATCAAAAGGCTCATATTTATTGGCT

Function

NR:

description
PREDICTED: von Willebrand factor isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU179281 True 203 lncRNA 0.39 1 52290000 52290202

Neighbor

gene id symbol gene type direction distance location
LOC118944140 NA coding upstream 860428 51429454 ~ 51429572 (+)
LOC118944142 NA coding upstream 867547 51422337 ~ 51422453 (+)
LOC118944199 NA coding upstream 867971 51421856 ~ 51422029 (+)
rl28 rl28 coding upstream 872846 51412121 ~ 51417154 (+)
LOC110491314 LOC106560671 coding upstream 884385 51375324 ~ 51405615 (+)
cspg4 cspg4 coding downstream 612989 52903191 ~ 53018812 (+)
snupn snupn coding downstream 843295 53133497 ~ 53167781 (+)
ptpn9a ptpn9 coding downstream 914879 53205081 ~ 53249227 (+)
sin3aa sin3a coding downstream 962606 53252808 ~ 53285424 (+)
wdr61 wdr61 coding downstream 1060898 53351100 ~ 53370380 (+)
G156829 NA non-coding upstream 19282 52270307 ~ 52270718 (+)
G156828 NA non-coding upstream 19935 52269795 ~ 52270065 (+)
G156812 NA non-coding upstream 30931 52258771 ~ 52259069 (+)
G156769 NA non-coding upstream 58345 52231452 ~ 52231655 (+)
G156756 NA non-coding upstream 62139 52223516 ~ 52227861 (+)
G156864 NA non-coding downstream 4570 52294772 ~ 52294981 (+)
G156900 NA non-coding downstream 49781 52339983 ~ 52380989 (+)
G157095 NA non-coding downstream 177364 52467566 ~ 52468071 (+)
G157099 NA non-coding downstream 177958 52468160 ~ 52468366 (+)
G157111 NA non-coding downstream 189801 52480003 ~ 52480208 (+)
G156000 LOC106560791 other upstream 465818 51816510 ~ 51824182 (+)
G155541 NA other upstream 868878 51420847 ~ 51421122 (+)
LOC110501653 LOC106560673 other upstream 967567 51317121 ~ 51339537 (+)
G154859 NA other upstream 1122826 51165415 ~ 51167174 (+)
G158778 LOC106560766 other downstream 1731406 54021608 ~ 54021904 (+)
G159415 NA other downstream 2062781 54352983 ~ 54353388 (+)
G159889 LOC106562215 other downstream 2438094 54728296 ~ 54728860 (+)
G160569 NA other downstream 3655941 55946143 ~ 55947245 (+)
G161687 NA other downstream 3954842 56245044 ~ 56252598 (+)

Expression


Co-expression Network