G157095


Basic Information

Item Value
gene id G157095
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 52467566 ~ 52468071 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU179524
atggtggaaaataagtatttggtcacctacaaacaagcaagatttctggctctcacagacctgtaccttcttctttaagaggctcctctgtcctccactcgttacatgtattaatggcacctgtttgaacttgttatcagtatataagacacctgtccacaacctcaaacagtcacactccaaactccactatggccaagaccaaagagctgtcaaaggacaccagaaacaaaattgtagacctacaccaggctgggaagactgaatctgcaataggtaagtagcttggtttgaagaaatcaactgtgggagcaattattaggaaatggaagagatacaagaccactgataatctccctcgatctggggctccatgcaagatctcaccccgtggggtcaaaatgatcacaagaacggtgagcaaaaatctcagaaccacacggggggacctagtgaatgacctgcagagagctgggaccaaagtaacaaagcctaccatcagtaac

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU179524 True 506 lncRNA 0.45 1 52467566 52468071

Neighbor

gene id symbol gene type direction distance location
LOC118944140 NA coding upstream 1037994 51429454 ~ 51429572 (+)
LOC118944142 NA coding upstream 1045113 51422337 ~ 51422453 (+)
LOC118944199 NA coding upstream 1045537 51421856 ~ 51422029 (+)
rl28 rl28 coding upstream 1050412 51412121 ~ 51417154 (+)
LOC110491314 LOC106560671 coding upstream 1061951 51375324 ~ 51405615 (+)
cspg4 cspg4 coding downstream 435120 52903191 ~ 53018812 (+)
snupn snupn coding downstream 665426 53133497 ~ 53167781 (+)
ptpn9a ptpn9 coding downstream 737010 53205081 ~ 53249227 (+)
sin3aa sin3a coding downstream 784737 53252808 ~ 53285424 (+)
wdr61 wdr61 coding downstream 883029 53351100 ~ 53370380 (+)
G156900 NA non-coding upstream 86577 52339983 ~ 52380989 (+)
G156864 NA non-coding upstream 172585 52294772 ~ 52294981 (+)
G156858 NA non-coding upstream 177364 52290000 ~ 52290202 (+)
G156829 NA non-coding upstream 196848 52270307 ~ 52270718 (+)
G156828 NA non-coding upstream 197501 52269795 ~ 52270065 (+)
G157099 NA non-coding downstream 89 52468160 ~ 52468366 (+)
G157111 NA non-coding downstream 11932 52480003 ~ 52480208 (+)
G157139 NA non-coding downstream 27624 52495695 ~ 52495896 (+)
G157143 NA non-coding downstream 29435 52497506 ~ 52526149 (+)
G157165 NA non-coding downstream 65679 52533750 ~ 52538011 (+)
G156000 LOC106560791 other upstream 643384 51816510 ~ 51824182 (+)
G155541 NA other upstream 1046444 51420847 ~ 51421122 (+)
LOC110501653 LOC106560673 other upstream 1145133 51317121 ~ 51339537 (+)
G154859 NA other upstream 1300392 51165415 ~ 51167174 (+)
G158778 LOC106560766 other downstream 1553537 54021608 ~ 54021904 (+)
G159415 NA other downstream 1884912 54352983 ~ 54353388 (+)
G159889 LOC106562215 other downstream 2260225 54728296 ~ 54728860 (+)
G160569 NA other downstream 3478072 55946143 ~ 55947245 (+)
G161687 NA other downstream 3776973 56245044 ~ 56252598 (+)

Expression


Co-expression Network