Gene
RNA
| Item | Value |
|---|---|
| gene id | G157139 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 52495695 ~ 52495896 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU179569 | True | 202 | lncRNA | 0.29 | 1 | 52495695 | 52495896 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118944140 | NA | coding | upstream | 1066123 | 51429454 ~ 51429572 (+) |
| LOC118944142 | NA | coding | upstream | 1073242 | 51422337 ~ 51422453 (+) |
| LOC118944199 | NA | coding | upstream | 1073666 | 51421856 ~ 51422029 (+) |
| rl28 | rl28 | coding | upstream | 1078541 | 51412121 ~ 51417154 (+) |
| LOC110491314 | LOC106560671 | coding | upstream | 1090080 | 51375324 ~ 51405615 (+) |
| cspg4 | cspg4 | coding | downstream | 407295 | 52903191 ~ 53018812 (+) |
| snupn | snupn | coding | downstream | 637601 | 53133497 ~ 53167781 (+) |
| ptpn9a | ptpn9 | coding | downstream | 709185 | 53205081 ~ 53249227 (+) |
| sin3aa | sin3a | coding | downstream | 756912 | 53252808 ~ 53285424 (+) |
| wdr61 | wdr61 | coding | downstream | 855204 | 53351100 ~ 53370380 (+) |
| G157111 | NA | non-coding | upstream | 15487 | 52480003 ~ 52480208 (+) |
| G157099 | NA | non-coding | upstream | 27329 | 52468160 ~ 52468366 (+) |
| G157095 | NA | non-coding | upstream | 27624 | 52467566 ~ 52468071 (+) |
| G156900 | NA | non-coding | upstream | 114706 | 52339983 ~ 52380989 (+) |
| G156864 | NA | non-coding | upstream | 200714 | 52294772 ~ 52294981 (+) |
| G157143 | NA | non-coding | downstream | 1610 | 52497506 ~ 52526149 (+) |
| G157165 | NA | non-coding | downstream | 37854 | 52533750 ~ 52538011 (+) |
| G157220 | NA | non-coding | downstream | 58933 | 52554829 ~ 52555062 (+) |
| G157297 | NA | non-coding | downstream | 106229 | 52602125 ~ 52602332 (+) |
| G157347 | NA | non-coding | downstream | 137371 | 52633267 ~ 52633530 (+) |
| G156000 | LOC106560791 | other | upstream | 671513 | 51816510 ~ 51824182 (+) |
| G155541 | NA | other | upstream | 1074573 | 51420847 ~ 51421122 (+) |
| LOC110501653 | LOC106560673 | other | upstream | 1173262 | 51317121 ~ 51339537 (+) |
| G154859 | NA | other | upstream | 1328521 | 51165415 ~ 51167174 (+) |
| G158778 | LOC106560766 | other | downstream | 1525712 | 54021608 ~ 54021904 (+) |
| G159415 | NA | other | downstream | 1857087 | 54352983 ~ 54353388 (+) |
| G159889 | LOC106562215 | other | downstream | 2232400 | 54728296 ~ 54728860 (+) |
| G160569 | NA | other | downstream | 3450247 | 55946143 ~ 55947245 (+) |
| G161687 | NA | other | downstream | 3749148 | 56245044 ~ 56252598 (+) |
