G157347


Basic Information

Item Value
gene id G157347
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 52633267 ~ 52633530 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU179783
cctcaaacatacatgtatcttatagcGTTTtgaaggtaatcttgttgttaaacCCACCTCAGTgttcgatttcaaataggctttacagcgaaagcaccacaaatgattgttaggtcaccaccaactcacagaaaaacacagccatttttccagccaaagagaggagtcacaaaagcacaaatagagCTAAAATGagtcactaacctttgatgatcttcatcagacgaCACTCATAGGGCTTCATGTtccacaatacatgtatgt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU179783 True 264 lncRNA 0.39 1 52633267 52633530

Neighbor

gene id symbol gene type direction distance location
LOC118944140 NA coding upstream 1203695 51429454 ~ 51429572 (+)
LOC118944142 NA coding upstream 1210814 51422337 ~ 51422453 (+)
LOC118944199 NA coding upstream 1211238 51421856 ~ 51422029 (+)
rl28 rl28 coding upstream 1216113 51412121 ~ 51417154 (+)
LOC110491314 LOC106560671 coding upstream 1227652 51375324 ~ 51405615 (+)
cspg4 cspg4 coding downstream 269661 52903191 ~ 53018812 (+)
snupn snupn coding downstream 499967 53133497 ~ 53167781 (+)
ptpn9a ptpn9 coding downstream 571551 53205081 ~ 53249227 (+)
sin3aa sin3a coding downstream 619278 53252808 ~ 53285424 (+)
wdr61 wdr61 coding downstream 717570 53351100 ~ 53370380 (+)
G157297 NA non-coding upstream 30935 52602125 ~ 52602332 (+)
G157220 NA non-coding upstream 78205 52554829 ~ 52555062 (+)
G157165 NA non-coding upstream 95256 52533750 ~ 52538011 (+)
G157143 NA non-coding upstream 107118 52497506 ~ 52526149 (+)
G157139 NA non-coding upstream 137371 52495695 ~ 52495896 (+)
G157354 NA non-coding downstream 7005 52640535 ~ 52640734 (+)
G157357 NA non-coding downstream 7564 52641094 ~ 52641316 (+)
G157370 NA non-coding downstream 15647 52649177 ~ 52649422 (+)
G157418 NA non-coding downstream 50342 52683872 ~ 52684098 (+)
G157430 NA non-coding downstream 58244 52691774 ~ 52692134 (+)
G156000 LOC106560791 other upstream 809085 51816510 ~ 51824182 (+)
G155541 NA other upstream 1212145 51420847 ~ 51421122 (+)
LOC110501653 LOC106560673 other upstream 1310834 51317121 ~ 51339537 (+)
G154859 NA other upstream 1466093 51165415 ~ 51167174 (+)
G158778 LOC106560766 other downstream 1388078 54021608 ~ 54021904 (+)
G159415 NA other downstream 1719453 54352983 ~ 54353388 (+)
G159889 LOC106562215 other downstream 2094766 54728296 ~ 54728860 (+)
G160569 NA other downstream 3312613 55946143 ~ 55947245 (+)
G161687 NA other downstream 3611514 56245044 ~ 56252598 (+)

Expression


Co-expression Network