G157354


Basic Information

Item Value
gene id G157354
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 52640535 ~ 52640734 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU179790
tagcgaaatgcttgtgcttctagttccgacaatgcagtaataatcaacgagtaatctaacctaacaattccacaactactaccttataaacacaattgtaaagggataaagaatatgtacataaagatacatgaatgagtgatggtacagaacggcataggcatgatgcagtagatggtatagagtacactatatacata

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU179790 True 200 lncRNA 0.35 1 52640535 52640734

Neighbor

gene id symbol gene type direction distance location
LOC118944140 NA coding upstream 1210963 51429454 ~ 51429572 (+)
LOC118944142 NA coding upstream 1218082 51422337 ~ 51422453 (+)
LOC118944199 NA coding upstream 1218506 51421856 ~ 51422029 (+)
rl28 rl28 coding upstream 1223381 51412121 ~ 51417154 (+)
LOC110491314 LOC106560671 coding upstream 1234920 51375324 ~ 51405615 (+)
cspg4 cspg4 coding downstream 262457 52903191 ~ 53018812 (+)
snupn snupn coding downstream 492763 53133497 ~ 53167781 (+)
ptpn9a ptpn9 coding downstream 564347 53205081 ~ 53249227 (+)
sin3aa sin3a coding downstream 612074 53252808 ~ 53285424 (+)
wdr61 wdr61 coding downstream 710366 53351100 ~ 53370380 (+)
G157347 NA non-coding upstream 7005 52633267 ~ 52633530 (+)
G157297 NA non-coding upstream 38203 52602125 ~ 52602332 (+)
G157220 NA non-coding upstream 85473 52554829 ~ 52555062 (+)
G157165 NA non-coding upstream 102524 52533750 ~ 52538011 (+)
G157143 NA non-coding upstream 114386 52497506 ~ 52526149 (+)
G157357 NA non-coding downstream 360 52641094 ~ 52641316 (+)
G157370 NA non-coding downstream 8443 52649177 ~ 52649422 (+)
G157418 NA non-coding downstream 43138 52683872 ~ 52684098 (+)
G157430 NA non-coding downstream 51040 52691774 ~ 52692134 (+)
G157492 NA non-coding downstream 95191 52735925 ~ 52736182 (+)
G156000 LOC106560791 other upstream 816353 51816510 ~ 51824182 (+)
G155541 NA other upstream 1219413 51420847 ~ 51421122 (+)
LOC110501653 LOC106560673 other upstream 1318102 51317121 ~ 51339537 (+)
G154859 NA other upstream 1473361 51165415 ~ 51167174 (+)
G158778 LOC106560766 other downstream 1380874 54021608 ~ 54021904 (+)
G159415 NA other downstream 1712249 54352983 ~ 54353388 (+)
G159889 LOC106562215 other downstream 2087562 54728296 ~ 54728860 (+)
G160569 NA other downstream 3305409 55946143 ~ 55947245 (+)
G161687 NA other downstream 3604310 56245044 ~ 56252598 (+)

Expression


Co-expression Network