Gene
RNA
| Item | Value |
|---|---|
| gene id | G157418 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 52683872 ~ 52684098 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU179856 | True | 227 | lncRNA | 0.35 | 1 | 52683872 | 52684098 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118944140 | NA | coding | upstream | 1254300 | 51429454 ~ 51429572 (+) |
| LOC118944142 | NA | coding | upstream | 1261419 | 51422337 ~ 51422453 (+) |
| LOC118944199 | NA | coding | upstream | 1261843 | 51421856 ~ 51422029 (+) |
| rl28 | rl28 | coding | upstream | 1266718 | 51412121 ~ 51417154 (+) |
| LOC110491314 | LOC106560671 | coding | upstream | 1278257 | 51375324 ~ 51405615 (+) |
| cspg4 | cspg4 | coding | downstream | 219093 | 52903191 ~ 53018812 (+) |
| snupn | snupn | coding | downstream | 449399 | 53133497 ~ 53167781 (+) |
| ptpn9a | ptpn9 | coding | downstream | 520983 | 53205081 ~ 53249227 (+) |
| sin3aa | sin3a | coding | downstream | 568710 | 53252808 ~ 53285424 (+) |
| wdr61 | wdr61 | coding | downstream | 667002 | 53351100 ~ 53370380 (+) |
| G157370 | NA | non-coding | upstream | 34450 | 52649177 ~ 52649422 (+) |
| G157357 | NA | non-coding | upstream | 42556 | 52641094 ~ 52641316 (+) |
| G157354 | NA | non-coding | upstream | 43138 | 52640535 ~ 52640734 (+) |
| G157347 | NA | non-coding | upstream | 50342 | 52633267 ~ 52633530 (+) |
| G157297 | NA | non-coding | upstream | 81540 | 52602125 ~ 52602332 (+) |
| G157430 | NA | non-coding | downstream | 7676 | 52691774 ~ 52692134 (+) |
| G157492 | NA | non-coding | downstream | 51827 | 52735925 ~ 52736182 (+) |
| G157495 | NA | non-coding | downstream | 54983 | 52739081 ~ 52739422 (+) |
| G157499 | NA | non-coding | downstream | 57446 | 52741544 ~ 52741760 (+) |
| G157500 | NA | non-coding | downstream | 58402 | 52742500 ~ 52785585 (+) |
| G156000 | LOC106560791 | other | upstream | 859690 | 51816510 ~ 51824182 (+) |
| G155541 | NA | other | upstream | 1262750 | 51420847 ~ 51421122 (+) |
| LOC110501653 | LOC106560673 | other | upstream | 1361439 | 51317121 ~ 51339537 (+) |
| G154859 | NA | other | upstream | 1516698 | 51165415 ~ 51167174 (+) |
| G158778 | LOC106560766 | other | downstream | 1337510 | 54021608 ~ 54021904 (+) |
| G159415 | NA | other | downstream | 1668885 | 54352983 ~ 54353388 (+) |
| G159889 | LOC106562215 | other | downstream | 2044198 | 54728296 ~ 54728860 (+) |
| G160569 | NA | other | downstream | 3262045 | 55946143 ~ 55947245 (+) |
| G161687 | NA | other | downstream | 3560946 | 56245044 ~ 56252598 (+) |
