G157430


Basic Information

Item Value
gene id G157430
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 52691774 ~ 52692134 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU179868
gagagtcggaccaaaatgcagcgtgtagattgcgatccatgttttaatgaacaaacgtaaaacacgaatcaatgcaaacactacaaaataaagaacgtgatgaacgtaacgaaaacctaaaacagcctatctggtgaaaaacacatagacaggaacaatcacccacaaaaccacagtgaaccccaggctacctaaatatggttcccaatcagagacaatgacgaacacctgcctctgactgagaaccatatcaggctgaacatagaaatagacaaacaagacatgaaacatagaatgcccactcagatcacaccctgaccaatcaaaacatagaaaatacaaagtaaactatggtcagggc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU179868 True 361 lncRNA 0.41 1 52691774 52692134

Neighbor

gene id symbol gene type direction distance location
LOC118944140 NA coding upstream 1262202 51429454 ~ 51429572 (+)
LOC118944142 NA coding upstream 1269321 51422337 ~ 51422453 (+)
LOC118944199 NA coding upstream 1269745 51421856 ~ 51422029 (+)
rl28 rl28 coding upstream 1274620 51412121 ~ 51417154 (+)
LOC110491314 LOC106560671 coding upstream 1286159 51375324 ~ 51405615 (+)
cspg4 cspg4 coding downstream 211057 52903191 ~ 53018812 (+)
snupn snupn coding downstream 441363 53133497 ~ 53167781 (+)
ptpn9a ptpn9 coding downstream 512947 53205081 ~ 53249227 (+)
sin3aa sin3a coding downstream 560674 53252808 ~ 53285424 (+)
wdr61 wdr61 coding downstream 658966 53351100 ~ 53370380 (+)
G157418 NA non-coding upstream 7676 52683872 ~ 52684098 (+)
G157370 NA non-coding upstream 42352 52649177 ~ 52649422 (+)
G157357 NA non-coding upstream 50458 52641094 ~ 52641316 (+)
G157354 NA non-coding upstream 51040 52640535 ~ 52640734 (+)
G157347 NA non-coding upstream 58244 52633267 ~ 52633530 (+)
G157492 NA non-coding downstream 43791 52735925 ~ 52736182 (+)
G157495 NA non-coding downstream 46947 52739081 ~ 52739422 (+)
G157499 NA non-coding downstream 49410 52741544 ~ 52741760 (+)
G157500 NA non-coding downstream 50366 52742500 ~ 52785585 (+)
G157726 NA non-coding downstream 400699 53092833 ~ 53093097 (+)
G156000 LOC106560791 other upstream 867592 51816510 ~ 51824182 (+)
G155541 NA other upstream 1270652 51420847 ~ 51421122 (+)
LOC110501653 LOC106560673 other upstream 1369341 51317121 ~ 51339537 (+)
G154859 NA other upstream 1524600 51165415 ~ 51167174 (+)
G158778 LOC106560766 other downstream 1329474 54021608 ~ 54021904 (+)
G159415 NA other downstream 1660849 54352983 ~ 54353388 (+)
G159889 LOC106562215 other downstream 2036162 54728296 ~ 54728860 (+)
G160569 NA other downstream 3254009 55946143 ~ 55947245 (+)
G161687 NA other downstream 3552910 56245044 ~ 56252598 (+)

Expression


Co-expression Network