Gene
RNA
| Item | Value |
|---|---|
| gene id | G158218 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 53501582 ~ 53501878 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU180697 | True | 297 | lncRNA | 0.47 | 1 | 53501582 | 53501878 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| psma4 | psma4 | coding | upstream | 35266 | 53444044 ~ 53466316 (+) |
| ireb2 | ireb2 | coding | upstream | 62813 | 53416113 ~ 53438769 (+) |
| wdr61 | wdr61 | coding | upstream | 131202 | 53351100 ~ 53370380 (+) |
| sin3aa | sin3a | coding | upstream | 216158 | 53252808 ~ 53285424 (+) |
| ptpn9a | ptpn9 | coding | upstream | 252355 | 53205081 ~ 53249227 (+) |
| rbpms2a | LOC106560779 | coding | downstream | 135427 | 53637305 ~ 53651854 (+) |
| LOC110491473 | ap3b2 | coding | downstream | 197940 | 53699818 ~ 53797088 (+) |
| cpeb1a | LOC106560740 | coding | downstream | 295348 | 53797226 ~ 53823634 (+) |
| snx1a | LOC106560773 | coding | downstream | 350950 | 53852828 ~ 53868273 (+) |
| snx22 | LOC106560771 | coding | downstream | 365638 | 53867516 ~ 53890738 (+) |
| G158212 | NA | non-coding | upstream | 4317 | 53496857 ~ 53497265 (+) |
| G158182 | NA | non-coding | upstream | 88838 | 53412520 ~ 53412744 (+) |
| G158167 | NA | non-coding | upstream | 110335 | 53390250 ~ 53391247 (+) |
| G158109 | crabp1 | non-coding | upstream | 158056 | 53312024 ~ 53343526 (+) |
| G158490 | NA | non-coding | downstream | 41483 | 53543361 ~ 53543986 (+) |
| G158492 | NA | non-coding | downstream | 42651 | 53544529 ~ 53544750 (+) |
| G158495 | NA | non-coding | downstream | 43693 | 53545571 ~ 53545773 (+) |
| G158496 | NA | non-coding | downstream | 43993 | 53545871 ~ 53546095 (+) |
| G158514 | NA | non-coding | downstream | 52480 | 53554358 ~ 53554623 (+) |
| G156000 | LOC106560791 | other | upstream | 1677400 | 51816510 ~ 51824182 (+) |
| G155541 | NA | other | upstream | 2080460 | 51420847 ~ 51421122 (+) |
| rl28 | rl28 | other | upstream | 2084464 | 51412121 ~ 51417154 (+) |
| LOC110501653 | LOC106560673 | other | upstream | 2179149 | 51317121 ~ 51339537 (+) |
| G154859 | NA | other | upstream | 2334408 | 51165415 ~ 51167174 (+) |
| G158778 | LOC106560766 | other | downstream | 519730 | 54021608 ~ 54021904 (+) |
| G159415 | NA | other | downstream | 851105 | 54352983 ~ 54353388 (+) |
| G159889 | LOC106562215 | other | downstream | 1226418 | 54728296 ~ 54728860 (+) |
| G160569 | NA | other | downstream | 2444265 | 55946143 ~ 55947245 (+) |
| G161687 | NA | other | downstream | 2743166 | 56245044 ~ 56252598 (+) |
