Gene
RNA
| Item | Value |
|---|---|
| gene id | G158584 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 53682642 ~ 53682859 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU181089 | True | 218 | lncRNA | 0.50 | 1 | 53682642 | 53682859 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| rbpms2a | LOC106560779 | coding | upstream | 30788 | 53637305 ~ 53651854 (+) |
| psma4 | psma4 | coding | upstream | 216326 | 53444044 ~ 53466316 (+) |
| ireb2 | ireb2 | coding | upstream | 243873 | 53416113 ~ 53438769 (+) |
| wdr61 | wdr61 | coding | upstream | 312262 | 53351100 ~ 53370380 (+) |
| sin3aa | sin3a | coding | upstream | 397218 | 53252808 ~ 53285424 (+) |
| LOC110491473 | ap3b2 | coding | downstream | 16959 | 53699818 ~ 53797088 (+) |
| cpeb1a | LOC106560740 | coding | downstream | 114367 | 53797226 ~ 53823634 (+) |
| snx1a | LOC106560773 | coding | downstream | 169969 | 53852828 ~ 53868273 (+) |
| snx22 | LOC106560771 | coding | downstream | 184657 | 53867516 ~ 53890738 (+) |
| LOC110491599 | NA | coding | downstream | 211275 | 53894134 ~ 53898191 (+) |
| G158607 | NA | non-coding | upstream | 5376 | 53676969 ~ 53677266 (+) |
| G158514 | NA | non-coding | upstream | 128019 | 53554358 ~ 53554623 (+) |
| G158496 | NA | non-coding | upstream | 136547 | 53545871 ~ 53546095 (+) |
| G158495 | NA | non-coding | upstream | 136869 | 53545571 ~ 53545773 (+) |
| G158492 | NA | non-coding | upstream | 137892 | 53544529 ~ 53544750 (+) |
| G158583 | NA | non-coding | downstream | 73 | 53682932 ~ 53685702 (+) |
| G158612 | NA | non-coding | downstream | 2917 | 53685776 ~ 53685981 (+) |
| G158613 | NA | non-coding | downstream | 3179 | 53686038 ~ 53686811 (+) |
| G158616 | NA | non-coding | downstream | 5821 | 53688680 ~ 53688980 (+) |
| G158617 | NA | non-coding | downstream | 6315 | 53689174 ~ 53689596 (+) |
| G156000 | LOC106560791 | other | upstream | 1858460 | 51816510 ~ 51824182 (+) |
| G155541 | NA | other | upstream | 2261520 | 51420847 ~ 51421122 (+) |
| rl28 | rl28 | other | upstream | 2265524 | 51412121 ~ 51417154 (+) |
| LOC110501653 | LOC106560673 | other | upstream | 2360209 | 51317121 ~ 51339537 (+) |
| G154859 | NA | other | upstream | 2515468 | 51165415 ~ 51167174 (+) |
| G158778 | LOC106560766 | other | downstream | 338749 | 54021608 ~ 54021904 (+) |
| G159415 | NA | other | downstream | 670124 | 54352983 ~ 54353388 (+) |
| G159889 | LOC106562215 | other | downstream | 1045437 | 54728296 ~ 54728860 (+) |
| G160569 | NA | other | downstream | 2263284 | 55946143 ~ 55947245 (+) |
| G161687 | NA | other | downstream | 2562185 | 56245044 ~ 56252598 (+) |
