G158706


Basic Information

Item Value
gene id G158706
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 53824537 ~ 53824776 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU181217
CACAAACCAAGTTCCCGCCAGTTTTACAGAATGTTAGTGAGAGGTGCAATCCATGAATACTAAGTCATTATCAACTTTCTACAGCTGCTGCAGCATATTGATGTCTGAATGATGGTTAATGCCATAGAATTATGAATTACAATACTAGAATGGCATCCACCCTTGTGATAATCCAAAAGTCAGCCATGTTGGTCTGTGATCAGATGAATGTGAAGAATTTATCTGCACTTTATGTGTGCT

Function

NR:

description
PREDICTED: plexin-A1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU181217 True 240 lncRNA 0.40 1 53824537 53824776

Neighbor

gene id symbol gene type direction distance location
cpeb1a LOC106560740 coding upstream 903 53797226 ~ 53823634 (+)
LOC110491473 ap3b2 coding upstream 27449 53699818 ~ 53797088 (+)
rbpms2a LOC106560779 coding upstream 172683 53637305 ~ 53651854 (+)
psma4 psma4 coding upstream 358221 53444044 ~ 53466316 (+)
ireb2 ireb2 coding upstream 385768 53416113 ~ 53438769 (+)
snx1a LOC106560773 coding downstream 28052 53852828 ~ 53868273 (+)
snx22 LOC106560771 coding downstream 42740 53867516 ~ 53890738 (+)
LOC110491599 NA coding downstream 69358 53894134 ~ 53898191 (+)
bbs4 LOC106560769 coding downstream 81158 53905934 ~ 53926823 (+)
kcnj11l irk11 coding downstream 117077 53941853 ~ 53969163 (+)
G158618 NA non-coding upstream 134134 53690202 ~ 53690403 (+)
G158617 NA non-coding upstream 134941 53689174 ~ 53689596 (+)
G158616 NA non-coding upstream 135557 53688680 ~ 53688980 (+)
G158613 NA non-coding upstream 137726 53686038 ~ 53686811 (+)
G158612 NA non-coding upstream 138556 53685776 ~ 53685981 (+)
G158707 NA non-coding downstream 626 53825402 ~ 53825723 (+)
G158731 NA non-coding downstream 63768 53888544 ~ 53888842 (+)
G158732 NA non-coding downstream 64128 53888904 ~ 53889239 (+)
G158742 NA non-coding downstream 90198 53914974 ~ 54010809 (+)
G158696 cd59-2 non-coding downstream 144678 53969454 ~ 53970875 (+)
G156000 LOC106560791 other upstream 2000355 51816510 ~ 51824182 (+)
G155541 NA other upstream 2403415 51420847 ~ 51421122 (+)
rl28 rl28 other upstream 2407419 51412121 ~ 51417154 (+)
LOC110501653 LOC106560673 other upstream 2502104 51317121 ~ 51339537 (+)
G154859 NA other upstream 2657363 51165415 ~ 51167174 (+)
G158778 LOC106560766 other downstream 196832 54021608 ~ 54021904 (+)
G159415 NA other downstream 528207 54352983 ~ 54353388 (+)
G159889 LOC106562215 other downstream 903520 54728296 ~ 54728860 (+)
G160569 NA other downstream 2121367 55946143 ~ 55947245 (+)
G161687 NA other downstream 2420268 56245044 ~ 56252598 (+)

Expression


Co-expression Network