Gene
RNA
| Item | Value |
|---|---|
| gene id | G158707 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 53825402 ~ 53825723 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU181218 | True | 322 | lncRNA | 0.39 | 1 | 53825402 | 53825723 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cpeb1a | LOC106560740 | coding | upstream | 1768 | 53797226 ~ 53823634 (+) |
| LOC110491473 | ap3b2 | coding | upstream | 28314 | 53699818 ~ 53797088 (+) |
| rbpms2a | LOC106560779 | coding | upstream | 173548 | 53637305 ~ 53651854 (+) |
| psma4 | psma4 | coding | upstream | 359086 | 53444044 ~ 53466316 (+) |
| ireb2 | ireb2 | coding | upstream | 386633 | 53416113 ~ 53438769 (+) |
| snx1a | LOC106560773 | coding | downstream | 27105 | 53852828 ~ 53868273 (+) |
| snx22 | LOC106560771 | coding | downstream | 41793 | 53867516 ~ 53890738 (+) |
| LOC110491599 | NA | coding | downstream | 68411 | 53894134 ~ 53898191 (+) |
| bbs4 | LOC106560769 | coding | downstream | 80211 | 53905934 ~ 53926823 (+) |
| kcnj11l | irk11 | coding | downstream | 116130 | 53941853 ~ 53969163 (+) |
| G158706 | NA | non-coding | upstream | 626 | 53824537 ~ 53824776 (+) |
| G158618 | NA | non-coding | upstream | 134999 | 53690202 ~ 53690403 (+) |
| G158617 | NA | non-coding | upstream | 135806 | 53689174 ~ 53689596 (+) |
| G158616 | NA | non-coding | upstream | 136422 | 53688680 ~ 53688980 (+) |
| G158613 | NA | non-coding | upstream | 138591 | 53686038 ~ 53686811 (+) |
| G158731 | NA | non-coding | downstream | 62821 | 53888544 ~ 53888842 (+) |
| G158732 | NA | non-coding | downstream | 63181 | 53888904 ~ 53889239 (+) |
| G158742 | NA | non-coding | downstream | 89251 | 53914974 ~ 54010809 (+) |
| G158696 | cd59-2 | non-coding | downstream | 143731 | 53969454 ~ 53970875 (+) |
| G158776 | NA | non-coding | downstream | 190032 | 54015755 ~ 54016247 (+) |
| G156000 | LOC106560791 | other | upstream | 2001220 | 51816510 ~ 51824182 (+) |
| G155541 | NA | other | upstream | 2404280 | 51420847 ~ 51421122 (+) |
| rl28 | rl28 | other | upstream | 2408284 | 51412121 ~ 51417154 (+) |
| LOC110501653 | LOC106560673 | other | upstream | 2502969 | 51317121 ~ 51339537 (+) |
| G154859 | NA | other | upstream | 2658228 | 51165415 ~ 51167174 (+) |
| G158778 | LOC106560766 | other | downstream | 195885 | 54021608 ~ 54021904 (+) |
| G159415 | NA | other | downstream | 527260 | 54352983 ~ 54353388 (+) |
| G159889 | LOC106562215 | other | downstream | 902573 | 54728296 ~ 54728860 (+) |
| G160569 | NA | other | downstream | 2120420 | 55946143 ~ 55947245 (+) |
| G161687 | NA | other | downstream | 2419321 | 56245044 ~ 56252598 (+) |
