Gene
RNA
| Item | Value |
|---|---|
| gene id | G158731 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 53888544 ~ 53888842 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU181244 | True | 299 | lncRNA | 0.48 | 1 | 53888544 | 53888842 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| snx1a | LOC106560773 | coding | upstream | 20271 | 53852828 ~ 53868273 (+) |
| cpeb1a | LOC106560740 | coding | upstream | 64910 | 53797226 ~ 53823634 (+) |
| LOC110491473 | ap3b2 | coding | upstream | 91456 | 53699818 ~ 53797088 (+) |
| rbpms2a | LOC106560779 | coding | upstream | 236690 | 53637305 ~ 53651854 (+) |
| psma4 | psma4 | coding | upstream | 422228 | 53444044 ~ 53466316 (+) |
| LOC110491599 | NA | coding | downstream | 5292 | 53894134 ~ 53898191 (+) |
| bbs4 | LOC106560769 | coding | downstream | 17092 | 53905934 ~ 53926823 (+) |
| kcnj11l | irk11 | coding | downstream | 53011 | 53941853 ~ 53969163 (+) |
| dgkzb | LOC106560764 | coding | downstream | 211925 | 54100767 ~ 54191587 (+) |
| itga11b | itga11 | coding | downstream | 476076 | 54364918 ~ 54455954 (+) |
| G158707 | NA | non-coding | upstream | 62821 | 53825402 ~ 53825723 (+) |
| G158706 | NA | non-coding | upstream | 63768 | 53824537 ~ 53824776 (+) |
| G158618 | NA | non-coding | upstream | 198141 | 53690202 ~ 53690403 (+) |
| G158617 | NA | non-coding | upstream | 198948 | 53689174 ~ 53689596 (+) |
| G158616 | NA | non-coding | upstream | 199564 | 53688680 ~ 53688980 (+) |
| G158732 | NA | non-coding | downstream | 62 | 53888904 ~ 53889239 (+) |
| G158742 | NA | non-coding | downstream | 26132 | 53914974 ~ 54010809 (+) |
| G158696 | cd59-2 | non-coding | downstream | 80612 | 53969454 ~ 53970875 (+) |
| G158776 | NA | non-coding | downstream | 126913 | 54015755 ~ 54016247 (+) |
| G158781 | NA | non-coding | downstream | 138816 | 54027658 ~ 54028060 (+) |
| G156000 | LOC106560791 | other | upstream | 2064362 | 51816510 ~ 51824182 (+) |
| G155541 | NA | other | upstream | 2467422 | 51420847 ~ 51421122 (+) |
| rl28 | rl28 | other | upstream | 2471426 | 51412121 ~ 51417154 (+) |
| LOC110501653 | LOC106560673 | other | upstream | 2566111 | 51317121 ~ 51339537 (+) |
| G154859 | NA | other | upstream | 2721370 | 51165415 ~ 51167174 (+) |
| G158778 | LOC106560766 | other | downstream | 132766 | 54021608 ~ 54021904 (+) |
| G159415 | NA | other | downstream | 464141 | 54352983 ~ 54353388 (+) |
| G159889 | LOC106562215 | other | downstream | 839454 | 54728296 ~ 54728860 (+) |
| G160569 | NA | other | downstream | 2057301 | 55946143 ~ 55947245 (+) |
| G161687 | NA | other | downstream | 2356202 | 56245044 ~ 56252598 (+) |
