G158696 (cd59-2)


Basic Information

Item Value
gene id G158696
gene name cd59-2
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 53969454 ~ 53970875 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU181207
GGTAGGTCATTTTATTGGTTTGGGTGAGTCTTCTAAAAGTGAGAATAAAACTGATTGACAATTTTCACAACCTttaacatggttttaaatgttattGAAACATATTTCTTATCACAACTTAAAACACTGGGGAAATATATGTTCAGCTTACATTTTTTCCCGTCTTGACTTGGGTGAGTAGGTGCCTAGGTGGGTGAATAGACTACTAGCATATCCCATCCCATCTGTGCAGCCTATCTTCACGACTAGTCTGCGTTCCTAGTGAAATGGATTAATCATCATGGTATAATGAGGCTGTAGTAAGTGTACATAAAGTGGGAGGAAACCCTCCTGCAGACAACAGTATGGATAGCATGTACAATGTTCCCGGTTATTCATTATTGGATGAACGAGGTTGTCTTAGCCTGATGCTTCTAAAGCGAATGGCCTAACCCAAATATGCACATAACTGTCAAGTATCAATTTACAACAACCAAAATCAATAAACATGTAGATTTCTATTTCGAGTGTTCCTCTAGGTTAGTTCACTGGGGGAAAAAAAGCATTTGAGAAAACAGAAAAGACTGCAGCTAAGTCGGACATTGTTCATCCACAATTTAAACAACACATGTAACtatcaacaacaacataaaatCATATTACTGACTGCAATCTCCAGCTCCATTGAGGGCTCTGCGTCAGCTGTGCATGGCAGTTGGAGCTCACAGTGAGGACCACCAGAAGACCAATAGTGACCCCATCAAAGCGAAAACTGGCCCTCTCGTGGCAATAGTGGTACTACTATTACACTGGTTGCTGCTGCAACACCGGTACGTGAACCCGGAGACGGCAGGGAACATCTGGGAAAGTCGAGAATTGTCACAGTCTGTGTATCTGATACACTGTCGAATTGTCTTCCCACCTTTTCACTCAGAGATAAACAGGAATCTTCATAAGTGCAGTCTTGAACATTTTCGCAGCGCCCTGTGTAATCGGAGCACTTGAAGCAACGAAGTGCACagcctaaaaatatatattttttaatgagtAGGTTATTTGAAGTCAGAGATATTTTTCAAACATCAACTTATAAATGTAGTTTGCATCACTCTGAGAGTACAATTGGCTCCGAGGCAACAAAACGTTTTCGGTGATCTTAAGAATTAACATACAAACTGCAATTGTTTTCATGCAACATATTAAACATATCACAAACATATCATATATAACATGC

Function

NR:

description
CD59 glycoprotein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU181207 True 1213 lncRNA 0.39 2 53969454 53970875

Neighbor

gene id symbol gene type direction distance location
kcnj11l irk11 coding upstream 291 53941853 ~ 53969163 (+)
bbs4 LOC106560769 coding upstream 42631 53905934 ~ 53926823 (+)
LOC110491599 NA coding upstream 71263 53894134 ~ 53898191 (+)
snx22 LOC106560771 coding upstream 78716 53867516 ~ 53890738 (+)
snx1a LOC106560773 coding upstream 101181 53852828 ~ 53868273 (+)
dgkzb LOC106560764 coding downstream 129892 54100767 ~ 54191587 (+)
itga11b itga11 coding downstream 394043 54364918 ~ 54455954 (+)
cln6b cln6 coding downstream 503148 54474023 ~ 54486909 (+)
calml4b calml4 coding downstream 520850 54491725 ~ 54504596 (+)
spg11 spg11 coding downstream 881937 54852812 ~ 54944780 (+)
G158732 NA non-coding upstream 80215 53888904 ~ 53889239 (+)
G158731 NA non-coding upstream 80612 53888544 ~ 53888842 (+)
G158707 NA non-coding upstream 143731 53825402 ~ 53825723 (+)
G158706 NA non-coding upstream 144678 53824537 ~ 53824776 (+)
G158618 NA non-coding upstream 279051 53690202 ~ 53690403 (+)
G158776 NA non-coding downstream 44880 54015755 ~ 54016247 (+)
G158781 NA non-coding downstream 56783 54027658 ~ 54028060 (+)
G158783 LOC106560766 non-coding downstream 58749 54029624 ~ 54029860 (+)
G158785 NA non-coding downstream 60940 54031815 ~ 54032061 (+)
G158818 NA non-coding downstream 104089 54074964 ~ 54075183 (+)
G156000 LOC106560791 other upstream 2145272 51816510 ~ 51824182 (+)
G155541 NA other upstream 2548332 51420847 ~ 51421122 (+)
rl28 rl28 other upstream 2552336 51412121 ~ 51417154 (+)
LOC110501653 LOC106560673 other upstream 2647021 51317121 ~ 51339537 (+)
G154859 NA other upstream 2802280 51165415 ~ 51167174 (+)
G158778 LOC106560766 other downstream 50733 54021608 ~ 54021904 (+)
G159415 NA other downstream 382108 54352983 ~ 54353388 (+)
G159889 LOC106562215 other downstream 757421 54728296 ~ 54728860 (+)
G160569 NA other downstream 1975268 55946143 ~ 55947245 (+)
G161687 NA other downstream 2274169 56245044 ~ 56252598 (+)

Expression


Co-expression Network