G158818


Basic Information

Item Value
gene id G158818
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 54074964 ~ 54075183 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU181336
ggccagacggaagccactcctcagtaaaaggcacttgacagcccacttggagtttgacaaaatgcacctaaaggacactcagaccatgagaaacaagattgtctggtctgatgaaaccaagattgaactctttggcctgaatgccaagcttcacacctggaggaaacctggcaccatccctatggtgaagcatggttgtggctgcatcatgctgtgggga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU181336 True 220 lncRNA 0.44 1 54074964 54075183

Neighbor

gene id symbol gene type direction distance location
kcnj11l irk11 coding upstream 105801 53941853 ~ 53969163 (+)
bbs4 LOC106560769 coding upstream 148141 53905934 ~ 53926823 (+)
LOC110491599 NA coding upstream 176773 53894134 ~ 53898191 (+)
snx22 LOC106560771 coding upstream 184226 53867516 ~ 53890738 (+)
snx1a LOC106560773 coding upstream 206691 53852828 ~ 53868273 (+)
dgkzb LOC106560764 coding downstream 25584 54100767 ~ 54191587 (+)
itga11b itga11 coding downstream 289735 54364918 ~ 54455954 (+)
cln6b cln6 coding downstream 398840 54474023 ~ 54486909 (+)
calml4b calml4 coding downstream 416542 54491725 ~ 54504596 (+)
spg11 spg11 coding downstream 777629 54852812 ~ 54944780 (+)
G158785 NA non-coding upstream 42903 54031815 ~ 54032061 (+)
G158783 LOC106560766 non-coding upstream 45104 54029624 ~ 54029860 (+)
G158781 NA non-coding upstream 46904 54027658 ~ 54028060 (+)
G158776 NA non-coding upstream 58717 54015755 ~ 54016247 (+)
G158742 NA non-coding upstream 64155 53914974 ~ 54010809 (+)
G158829 NA non-coding downstream 11292 54086475 ~ 54086791 (+)
G158839 NA non-coding downstream 116659 54191842 ~ 54192170 (+)
G158841 NA non-coding downstream 117427 54192610 ~ 54192886 (+)
G158887 NA non-coding downstream 138429 54213612 ~ 54216497 (+)
G158939 NA non-coding downstream 214915 54290098 ~ 54290351 (+)
G158778 LOC106560766 other upstream 53060 54021608 ~ 54021904 (+)
G156000 LOC106560791 other upstream 2250782 51816510 ~ 51824182 (+)
G155541 NA other upstream 2653842 51420847 ~ 51421122 (+)
rl28 rl28 other upstream 2657846 51412121 ~ 51417154 (+)
LOC110501653 LOC106560673 other upstream 2752531 51317121 ~ 51339537 (+)
G159415 NA other downstream 277800 54352983 ~ 54353388 (+)
G159889 LOC106562215 other downstream 653113 54728296 ~ 54728860 (+)
G160569 NA other downstream 1870960 55946143 ~ 55947245 (+)
G161687 NA other downstream 2169861 56245044 ~ 56252598 (+)
G162130 NA other downstream 2973131 57048314 ~ 57053642 (+)

Expression


Co-expression Network