G159415


Basic Information

Item Value
gene id G159415
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 54352983 ~ 54353388 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU181970
cacatacacatgtaaacctcggataatatagagctggcaggattttccatgcactggcagaacagagaagctacgtctggtaagatgaggggtgggggtgtgtgcctatttgtcaataacagctggtgcacaacgTCTAATATTAATGAAGTCTCGAGGTAtcgcttgcctgaggtagagtaccttgttataagctgtagactacactatctaccaagaaagTTCTCATCTACattattcgtagctgtctatttaccaccacagaccgatgctggcactaagaccgcactcaaccaactctataaggccataagcaagcaagaaaatgctcatccagaagcggcgctcctagtggccggggactttaatgcaggcaaatttaaatcggttttacctcatttctacc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU181970 True 406 TUCP 0.45 1 54352983 54353388

Neighbor

gene id symbol gene type direction distance location
dgkzb LOC106560764 coding upstream 161396 54100767 ~ 54191587 (+)
kcnj11l irk11 coding upstream 383820 53941853 ~ 53969163 (+)
bbs4 LOC106560769 coding upstream 426160 53905934 ~ 53926823 (+)
LOC110491599 NA coding upstream 454792 53894134 ~ 53898191 (+)
snx22 LOC106560771 coding upstream 462245 53867516 ~ 53890738 (+)
itga11b itga11 coding downstream 11530 54364918 ~ 54455954 (+)
cln6b cln6 coding downstream 120635 54474023 ~ 54486909 (+)
calml4b calml4 coding downstream 138337 54491725 ~ 54504596 (+)
spg11 spg11 coding downstream 499424 54852812 ~ 54944780 (+)
LOC110491832 LOC106560753 coding downstream 598513 54951901 ~ 54976149 (+)
G159412 NA non-coding upstream 1261 54346852 ~ 54351722 (+)
G159407 NA non-coding upstream 8608 54344009 ~ 54344375 (+)
G159405 NA non-coding upstream 9035 54343670 ~ 54343948 (+)
G158946 nox5 non-coding upstream 58572 54294176 ~ 54294411 (+)
G158945 NA non-coding upstream 58976 54293717 ~ 54294007 (+)
G159417 NA non-coding downstream 668 54354056 ~ 54354331 (+)
G159466 NA non-coding downstream 135391 54488779 ~ 54489407 (+)
G159507 NA non-coding downstream 177397 54530785 ~ 54530990 (+)
G159697 NA non-coding downstream 240872 54594260 ~ 54594503 (+)
G159896 NA non-coding downstream 382412 54735800 ~ 54736001 (+)
G158778 LOC106560766 other upstream 331079 54021608 ~ 54021904 (+)
G156000 LOC106560791 other upstream 2528801 51816510 ~ 51824182 (+)
G155541 NA other upstream 2931861 51420847 ~ 51421122 (+)
rl28 rl28 other upstream 2935865 51412121 ~ 51417154 (+)
LOC110501653 LOC106560673 other upstream 3030550 51317121 ~ 51339537 (+)
G159889 LOC106562215 other downstream 374908 54728296 ~ 54728860 (+)
G160569 NA other downstream 1592755 55946143 ~ 55947245 (+)
G161687 NA other downstream 1891656 56245044 ~ 56252598 (+)
G162130 NA other downstream 2694926 57048314 ~ 57053642 (+)
G163513 LOC106561046 other downstream 3574762 57928150 ~ 57931991 (+)

Expression


Co-expression Network