Gene
RNA
| Item | Value |
|---|---|
| gene id | G159466 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 54488779 ~ 54489407 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU182025 | True | 629 | lncRNA | 0.53 | 1 | 54488779 | 54489407 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cln6b | cln6 | coding | upstream | 1870 | 54474023 ~ 54486909 (+) |
| itga11b | itga11 | coding | upstream | 32825 | 54364918 ~ 54455954 (+) |
| dgkzb | LOC106560764 | coding | upstream | 297192 | 54100767 ~ 54191587 (+) |
| kcnj11l | irk11 | coding | upstream | 519616 | 53941853 ~ 53969163 (+) |
| bbs4 | LOC106560769 | coding | upstream | 561956 | 53905934 ~ 53926823 (+) |
| calml4b | calml4 | coding | downstream | 2318 | 54491725 ~ 54504596 (+) |
| spg11 | spg11 | coding | downstream | 363405 | 54852812 ~ 54944780 (+) |
| LOC110491832 | LOC106560753 | coding | downstream | 462494 | 54951901 ~ 54976149 (+) |
| LOC118940499 | NA | coding | downstream | 511032 | 55000439 ~ 55024185 (+) |
| znf609a | LOC106560750 | coding | downstream | 751993 | 55241400 ~ 55426308 (+) |
| G159417 | NA | non-coding | upstream | 134448 | 54354056 ~ 54354331 (+) |
| G159412 | NA | non-coding | upstream | 137057 | 54346852 ~ 54351722 (+) |
| G159407 | NA | non-coding | upstream | 144404 | 54344009 ~ 54344375 (+) |
| G159405 | NA | non-coding | upstream | 144831 | 54343670 ~ 54343948 (+) |
| G158946 | nox5 | non-coding | upstream | 194368 | 54294176 ~ 54294411 (+) |
| G159507 | NA | non-coding | downstream | 41378 | 54530785 ~ 54530990 (+) |
| G159697 | NA | non-coding | downstream | 104853 | 54594260 ~ 54594503 (+) |
| G159896 | NA | non-coding | downstream | 246393 | 54735800 ~ 54736001 (+) |
| G159923 | NA | non-coding | downstream | 262760 | 54752167 ~ 54752497 (+) |
| G159940 | NA | non-coding | downstream | 271924 | 54761331 ~ 54761557 (+) |
| G159415 | NA | other | upstream | 135391 | 54352983 ~ 54353388 (+) |
| G158778 | LOC106560766 | other | upstream | 466875 | 54021608 ~ 54021904 (+) |
| G156000 | LOC106560791 | other | upstream | 2664597 | 51816510 ~ 51824182 (+) |
| G155541 | NA | other | upstream | 3067657 | 51420847 ~ 51421122 (+) |
| rl28 | rl28 | other | upstream | 3071661 | 51412121 ~ 51417154 (+) |
| G159889 | LOC106562215 | other | downstream | 238889 | 54728296 ~ 54728860 (+) |
| G160569 | NA | other | downstream | 1456736 | 55946143 ~ 55947245 (+) |
| G161687 | NA | other | downstream | 1755637 | 56245044 ~ 56252598 (+) |
| G162130 | NA | other | downstream | 2558907 | 57048314 ~ 57053642 (+) |
| G163513 | LOC106561046 | other | downstream | 3438743 | 57928150 ~ 57931991 (+) |
