G159697


Basic Information

Item Value
gene id G159697
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 54594260 ~ 54594503 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU182262
ccagtctccagaccttaatcccatagacaatctgtggagggagctgaaggttcgagttgccaaacgtcagcctcgaaaccttaatgacttggagaagatctgtaaagagaagtgggacaaaatccctcctgagatgtgtgcaaacctggtggccaactacaagaaacgtctgacctctgtgattgccaacaagggttttgccaccaagtactaagtcatgttttgcagaggggtcaaatactta

Function

NR:

description
transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU182262 True 244 lncRNA 0.42 1 54594260 54594503

Neighbor

gene id symbol gene type direction distance location
calml4b calml4 coding upstream 89664 54491725 ~ 54504596 (+)
cln6b cln6 coding upstream 107351 54474023 ~ 54486909 (+)
itga11b itga11 coding upstream 138306 54364918 ~ 54455954 (+)
dgkzb LOC106560764 coding upstream 402673 54100767 ~ 54191587 (+)
kcnj11l irk11 coding upstream 625097 53941853 ~ 53969163 (+)
spg11 spg11 coding downstream 258309 54852812 ~ 54944780 (+)
LOC110491832 LOC106560753 coding downstream 357398 54951901 ~ 54976149 (+)
LOC118940499 NA coding downstream 405936 55000439 ~ 55024185 (+)
znf609a LOC106560750 coding downstream 646897 55241400 ~ 55426308 (+)
LOC110491849 LOC106560749 coding downstream 884044 55478547 ~ 55535685 (+)
G159507 NA non-coding upstream 63270 54530785 ~ 54530990 (+)
G159466 NA non-coding upstream 104853 54488779 ~ 54489407 (+)
G159417 NA non-coding upstream 239929 54354056 ~ 54354331 (+)
G159412 NA non-coding upstream 242538 54346852 ~ 54351722 (+)
G159407 NA non-coding upstream 249885 54344009 ~ 54344375 (+)
G159896 NA non-coding downstream 141297 54735800 ~ 54736001 (+)
G159923 NA non-coding downstream 157664 54752167 ~ 54752497 (+)
G159940 NA non-coding downstream 166828 54761331 ~ 54761557 (+)
G159949 NA non-coding downstream 174321 54768824 ~ 54847968 (+)
G160045 NA non-coding downstream 346597 54941100 ~ 54941681 (+)
G159415 NA other upstream 240872 54352983 ~ 54353388 (+)
G158778 LOC106560766 other upstream 572356 54021608 ~ 54021904 (+)
G156000 LOC106560791 other upstream 2770078 51816510 ~ 51824182 (+)
G155541 NA other upstream 3173138 51420847 ~ 51421122 (+)
rl28 rl28 other upstream 3177142 51412121 ~ 51417154 (+)
G159889 LOC106562215 other downstream 133793 54728296 ~ 54728860 (+)
G160569 NA other downstream 1351640 55946143 ~ 55947245 (+)
G161687 NA other downstream 1650541 56245044 ~ 56252598 (+)
G162130 NA other downstream 2453811 57048314 ~ 57053642 (+)
G163513 LOC106561046 other downstream 3333647 57928150 ~ 57931991 (+)

Expression


Co-expression Network